Savage DF - Search Results

1

Autotrophic biofilms sustained by deeply sourced groundwater host diverse bacteria implicated in sulfur and hydrogen metabolism.

Valentin-Alvarado LE, Fakra SC, Probst AJ, Giska JR, Jaffe AL, Oltrogge LM, West-Roberts J, Rowland J, Manga M, Savage DF, Greening C, Baker BJ, Banfield JF. Valentin-Alvarado LE, et al. Among authors: savage df. Microbiome. 2024 Jan 26;12(1):15. doi: 10.1186/s40168-023-01704-w. Microbiome. 2024. PMID: 38273328 Free PMC article.

2

Programmed Ribosomal Frameshifting Mediates Expression of the α-Carboxysome.

Chaijarasphong T, Nichols RJ, Kortright KE, Nixon CF, Teng PK, Oltrogge LM, Savage DF. Chaijarasphong T, et al. Among authors: savage df. J Mol Biol. 2016 Jan 16;428(1):153-164. doi: 10.1016/j.jmb.2015.11.017. Epub 2015 Dec 1. J Mol Biol. 2016. PMID: 26608811

3

Identification of a Minimal Peptide Tag for in Vivo and in Vitro Loading of Encapsulin.

Cassidy-Amstutz C, Oltrogge L, Going CC, Lee A, Teng P, Quintanilla D, East-Seletsky A, Williams ER, Savage DF. Cassidy-Amstutz C, et al. Among authors: savage df. Biochemistry. 2016 Jun 21;55(24):3461-8. doi: 10.1021/acs.biochem.6b00294. Epub 2016 Jun 7. Biochemistry. 2016. PMID: 27224728

4

Learning to Build a β-Carboxysome.

Blikstad C, Flamholz AI, Oltrogge LM, Savage DF. Blikstad C, et al. Among authors: savage df. Biochemistry. 2019 Apr 23;58(16):2091-2092. doi: 10.1021/acs.biochem.9b00199. Epub 2019 Apr 10. Biochemistry. 2019. PMID: 30968695 Free PMC article.

5

Multiplexed Charge Detection Mass Spectrometry for High-Throughput Single Ion Analysis of Large Molecules.

Harper CC, Elliott AG, Oltrogge LM, Savage DF, Williams ER. Harper CC, et al. Among authors: savage df. Anal Chem. 2019 Jun 4;91(11):7458-7465. doi: 10.1021/acs.analchem.9b01669. Epub 2019 May 22. Anal Chem. 2019. PMID: 31082222

6

Revisiting Trade-offs between Rubisco Kinetic Parameters.

Flamholz AI, Prywes N, Moran U, Davidi D, Bar-On YM, Oltrogge LM, Alves R, Savage D, Milo R. Flamholz AI, et al. Biochemistry. 2019 Aug 6;58(31):3365-3376. doi: 10.1021/acs.biochem.9b00237. Epub 2019 Jul 22. Biochemistry. 2019. PMID: 31259528 Free PMC article.

7

DABs are inorganic carbon pumps found throughout prokaryotic phyla.

Desmarais JJ, Flamholz AI, Blikstad C, Dugan EJ, Laughlin TG, Oltrogge LM, Chen AW, Wetmore K, Diamond S, Wang JY, Savage DF. Desmarais JJ, et al. Among authors: savage df. Nat Microbiol. 2019 Dec;4(12):2204-2215. doi: 10.1038/s41564-019-0520-8. Epub 2019 Aug 12. Nat Microbiol. 2019. PMID: 31406332 Free PMC article.

8

Multivalent interactions between CsoS2 and Rubisco mediate α-carboxysome formation.

Oltrogge LM, Chaijarasphong T, Chen AW, Bolin ER, Marqusee S, Savage DF. Oltrogge LM, et al. Among authors: savage df. Nat Struct Mol Biol. 2020 Mar;27(3):281-287. doi: 10.1038/s41594-020-0387-7. Epub 2020 Mar 2. Nat Struct Mol Biol. 2020. PMID: 32123388 Free PMC article.

9

Discovery and characterization of a novel family of prokaryotic nanocompartments involved in sulfur metabolism.

Nichols RJ, LaFrance B, Phillips NR, Radford DR, Oltrogge LM, Valentin-Alvarado LE, Bischoff AJ, Nogales E, Savage DF. Nichols RJ, et al. Among authors: savage df. Elife. 2021 Apr 6;10:e59288. doi: 10.7554/eLife.59288. Elife. 2021. PMID: 33821786 Free PMC article.

10

The encapsulin from Thermotoga maritima is a flavoprotein with a symmetry matched ferritin-like cargo protein.

LaFrance BJ, Cassidy-Amstutz C, Nichols RJ, Oltrogge LM, Nogales E, Savage DF. LaFrance BJ, et al. Among authors: savage df. Sci Rep. 2021 Nov 23;11(1):22810. doi: 10.1038/s41598-021-01932-w. Sci Rep. 2021. PMID: 34815415 Free PMC article.

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