Fan Y - Search Results

1

Unveiling inflammatory and prehypertrophic cell populations as key contributors to knee cartilage degeneration in osteoarthritis using multi-omics data integration.

Fan Y, Bian X, Meng X, Li L, Fu L, Zhang Y, Wang L, Zhang Y, Gao D, Guo X, Lammi MJ, Peng G, Sun S. Fan Y, et al. Ann Rheum Dis. 2024 Jun 12;83(7):926-944. doi: 10.1136/ard-2023-224420. Ann Rheum Dis. 2024. PMID: 38325908 Free PMC article.

2

IMAGE: high-powered detection of genetic effects on DNA methylation using integrated methylation QTL mapping and allele-specific analysis.

Fan Y, Vilgalys TP, Sun S, Peng Q, Tung J, Zhou X. Fan Y, et al. Genome Biol. 2019 Oct 24;20(1):220. doi: 10.1186/s13059-019-1813-1. Genome Biol. 2019. PMID: 31651351 Free PMC article.

3

Genome-Wide Differentially Methylated Region Analysis to Reveal Epigenetic Differences of Articular Cartilage in Kashin-Beck Disease and Osteoarthritis.

Fan Y, Gao D, Zhang Y, Zhu J, Zhang F, Wang L, Wen Y, Guo X, Sun S. Fan Y, et al. Front Cell Dev Biol. 2021 Mar 1;9:636291. doi: 10.3389/fcell.2021.636291. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 33732704 Free PMC article.

4

Delineating the dynamic evolution from preneoplasia to invasive lung adenocarcinoma by integrating single-cell RNA sequencing and spatial transcriptomics.

Zhu J, Fan Y, Xiong Y, Wang W, Chen J, Xia Y, Lei J, Gong L, Sun S, Jiang T. Zhu J, et al. Among authors: fan y. Exp Mol Med. 2022 Nov;54(11):2060-2076. doi: 10.1038/s12276-022-00896-9. Epub 2022 Nov 25. Exp Mol Med. 2022. PMID: 36434043 Free PMC article.

5

Recent advances in differential expression analysis for single-cell RNA-seq and spatially resolved transcriptomic studies.

Guo X, Ning J, Chen Y, Liu G, Zhao L, Fan Y, Sun S. Guo X, et al. Among authors: fan y. Brief Funct Genomics. 2024 Mar 20;23(2):95-109. doi: 10.1093/bfgp/elad011. Brief Funct Genomics. 2024. PMID: 37022699 Review.

6

Powerful and accurate detection of temporal gene expression patterns from multi-sample multi-stage single-cell transcriptomics data with TDEseq.

Fan Y, Li L, Sun S. Fan Y, et al. Genome Biol. 2024 Apr 15;25(1):96. doi: 10.1186/s13059-024-03237-3. Genome Biol. 2024. PMID: 38622747 Free PMC article.

7

Analysis of Cellular Heterogeneity in Immune Microenvironment of Primary Central Nervous System Lymphoma by Single-Cell Sequencing.

Wei B, Liu Z, Fan Y, Wang S, Dong C, Rao W, Yang F, Cheng G, Zhang J. Wei B, et al. Among authors: fan y. Front Oncol. 2021 Oct 4;11:683007. doi: 10.3389/fonc.2021.683007. eCollection 2021. Front Oncol. 2021. PMID: 34671548 Free PMC article.

8

Efficient and effective control of confounding in eQTL mapping studies through joint differential expression and Mendelian randomization analyses.

Fan Y, Zhu H, Song Y, Peng Q, Zhou X. Fan Y, et al. Bioinformatics. 2021 Apr 20;37(3):296-302. doi: 10.1093/bioinformatics/btaa715. Bioinformatics. 2021. PMID: 32790868 Free PMC article.

9

Identification of Tumor Microenvironment-Related Prognostic Biomarkers for Ovarian Serous Cancer 3-Year Mortality Using Targeted Maximum Likelihood Estimation: A TCGA Data Mining Study.

Wang L, Sun X, Jin C, Fan Y, Xue F. Wang L, et al. Among authors: fan y. Front Genet. 2021 Jun 3;12:625145. doi: 10.3389/fgene.2021.625145. eCollection 2021. Front Genet. 2021. PMID: 34149794 Free PMC article.

10

Detecting Susceptibility to Breast Cancer with SNP-SNP Interaction Using BPSOHS and Emotional Neural Networks.

Wang X, Peng Q, Fan Y. Wang X, et al. Among authors: fan y. Biomed Res Int. 2016;2016:5164347. doi: 10.1155/2016/5164347. Epub 2016 May 11. Biomed Res Int. 2016. PMID: 27294121 Free PMC article.

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