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Dispersion patterns of SARS-CoV-2 variants Gamma, Lambda and Mu in Latin America and the Caribbean.
Gräf T, Martinez AA, Bello G, Dellicour S, Lemey P, Colizza V, Mazzoli M, Poletto C, Cardoso VLO, da Silva AF; COVIGEN; Motta FC, Resende PC, Siqueira MM, Franco L, Gresh L, Gabastou JM, Rodriguez A, Vicari A, Aldighieri S, Mendez-Rico J, Leite JA. Gräf T, et al. Among authors: da silva af. Nat Commun. 2024 Feb 28;15(1):1837. doi: 10.1038/s41467-024-46143-9. Nat Commun. 2024. PMID: 38418815 Free PMC article.
Multiple Introductions Followed by Ongoing Community Spread of SARS-CoV-2 at One of the Largest Metropolitan Areas of Northeast Brazil.
Paiva MHS, Guedes DRD, Docena C, Bezerra MF, Dezordi FZ, Machado LC, Krokovsky L, Helvecio E, da Silva AF, Vasconcelos LRS, Rezende AM, da Silva SJR, Sales KGDS, de Sá BSLF, da Cruz DL, Cavalcanti CE, Neto AM, da Silva CTA, Mendes RPG, da Silva MAL, Gräf T, Resende PC, Bello G, Barros MDS, do Nascimento WRC, Arcoverde RML, Bezerra LCA, Filho SPB, Ayres CFJ, Wallau GL. Paiva MHS, et al. Among authors: da silva mal, da silva af, da silva cta, da cruz dl, da silva sjr. Viruses. 2020 Dec 9;12(12):1414. doi: 10.3390/v12121414. Viruses. 2020. PMID: 33316947 Free PMC article.
Phylogenetic-based inference reveals distinct transmission dynamics of SARS-CoV-2 lineages Gamma and P.2 in Brazil.
Gräf T, Bello G, Naveca FG, Gomes M, Cardoso VLO, da Silva AF, Dezordi FZ, Dos Santos MC, Santos KCO, Batista ÉLR, Magalhães ALÁ, Vinhal F, Miyajima F, Faoro H, Khouri R, Wallau GL, Delatorre E, Siqueira MM, Resende PC; Brazilian Ministry of Health COVID-19 Genomic Surveillance Network. Gräf T, et al. Among authors: da silva af. iScience. 2022 Apr 15;25(4):104156. doi: 10.1016/j.isci.2022.104156. Epub 2022 Mar 26. iScience. 2022. PMID: 35368908 Free PMC article.
Spatiotemporal transmission of SARS-CoV-2 lineages during 2020-2021 in Pernambuco-Brazil.
Machado LC, Dezordi FZ, de Lima GB, de Lima RE, Silva LCA, Pereira LdM, da Silva AF, Silva Neto AMd, Oliveira ALSd, Armstrong AdC, Pessoa-E-Silva R, Loyo RM, Silva BdO, de Almeida AR, da Rocha Pitta MG, Santos FdAdS, Mendonça Siqueira M, Resende PC, Delatorre E, Naveca FG, Miyajima F, Gräf T, do Carmo RF, Pereira MC, Campos TdL, Bezerra MF, Paiva MHS, Wallau GdL; Fiocruz COVID-19 Genomic Network. Machado LC, et al. Among authors: silva bdo, da silva af, silva lca, da rocha pitta mg, silva neto amd. Microbiol Spectr. 2024 Jun 4;12(6):e0421823. doi: 10.1128/spectrum.04218-23. Epub 2024 Apr 23. Microbiol Spectr. 2024. PMID: 38651879 Free PMC article.
ViralFlow v1.0-a computational workflow for streamlining viral genomic surveillance.
da Silva AF, da Silva Neto AM, Aksenen CF, Jeronimo PMC, Dezordi FZ, Almeida SP, Costa HMP, Salvato RS, Campos TL, Wallau GDL, Of The Fiocruz Genomic Network OB. da Silva AF, et al. Among authors: da silva neto am. NAR Genom Bioinform. 2024 May 25;6(2):lqae056. doi: 10.1093/nargab/lqae056. eCollection 2024 Jun. NAR Genom Bioinform. 2024. PMID: 38800829 Free PMC article.
322 results