Shi M - Search Results

1

Dual-role transcription factors stabilize intermediate expression levels.

He J, Huo X, Pei G, Jia Z, Yan Y, Yu J, Qu H, Xie Y, Yuan J, Zheng Y, Hu Y, Shi M, You K, Li T, Ma T, Zhang MQ, Ding S, Li P, Li Y. He J, et al. Among authors: shi m. Cell. 2024 May 23;187(11):2746-2766.e25. doi: 10.1016/j.cell.2024.03.023. Epub 2024 Apr 16. Cell. 2024. PMID: 38631355

2

BRD4-targeting PROTAC as a unique tool to study biomolecular condensates.

Shi Y, Liao Y, Liu Q, Ni Z, Zhang Z, Shi M, Li P, Li H, Rao Y. Shi Y, et al. Among authors: shi m. Cell Discov. 2023 May 9;9(1):47. doi: 10.1038/s41421-023-00544-0. Cell Discov. 2023. PMID: 37156794 Free PMC article.

3

Proteome-scale analysis of phase-separated proteins in immunofluorescence images.

Yu C, Shen B, You K, Huang Q, Shi M, Wu C, Chen Y, Zhang C, Li T. Yu C, et al. Among authors: shi m. Brief Bioinform. 2021 May 20;22(3):bbaa187. doi: 10.1093/bib/bbaa187. Brief Bioinform. 2021. PMID: 34020549

4

Quantifying the phase separation property of chromatin-associated proteins under physiological conditions using an anti-1,6-hexanediol index.

Shi M, You K, Chen T, Hou C, Liang Z, Liu M, Wang J, Wei T, Qin J, Chen Y, Zhang MQ, Li T. Shi M, et al. Genome Biol. 2021 Aug 17;22(1):229. doi: 10.1186/s13059-021-02456-2. Genome Biol. 2021. PMID: 34404448 Free PMC article.

5

Integration of single cell data by disentangled representation learning.

Guo T, Chen Y, Shi M, Li X, Zhang MQ. Guo T, et al. Among authors: shi m. Nucleic Acids Res. 2022 Jan 25;50(2):e8. doi: 10.1093/nar/gkab978. Nucleic Acids Res. 2022. PMID: 34850092 Free PMC article.

6

PhaSepDB: a database of liquid-liquid phase separation related proteins.

You K, Huang Q, Yu C, Shen B, Sevilla C, Shi M, Hermjakob H, Chen Y, Li T. You K, et al. Among authors: shi m. Nucleic Acids Res. 2020 Jan 8;48(D1):D354-D359. doi: 10.1093/nar/gkz847. Nucleic Acids Res. 2020. PMID: 31584089 Free PMC article.

7

SOTIP is a versatile method for microenvironment modeling with spatial omics data.

Yuan Z, Li Y, Shi M, Yang F, Gao J, Yao J, Zhang MQ. Yuan Z, et al. Among authors: shi m. Nat Commun. 2022 Nov 28;13(1):7330. doi: 10.1038/s41467-022-34867-5. Nat Commun. 2022. PMID: 36443314 Free PMC article.

8

Development and Experimental Validation of a Novel Prognostic Signature for Gastric Cancer.

Liu C, Huo Y, Zhang Y, Yin F, Chen T, Wang Z, Gao J, Jin P, Li X, Shi M, Zhang MQ. Liu C, et al. Among authors: shi m. Cancers (Basel). 2023 Mar 5;15(5):1610. doi: 10.3390/cancers15051610. Cancers (Basel). 2023. PMID: 36900401 Free PMC article.

9

Computational Screening of Phase-separating Proteins.

Shen B, Chen Z, Yu C, Chen T, Shi M, Li T. Shen B, et al. Among authors: shi m. Genomics Proteomics Bioinformatics. 2021 Feb;19(1):13-24. doi: 10.1016/j.gpb.2020.11.003. Epub 2021 Feb 19. Genomics Proteomics Bioinformatics. 2021. PMID: 33610793 Free PMC article. Review.

10

3D genome alterations associated with dysregulated HOXA13 expression in high-risk T-lineage acute lymphoblastic leukemia.

Yang L, Chen F, Zhu H, Chen Y, Dong B, Shi M, Wang W, Jiang Q, Zhang L, Huang X, Zhang MQ, Wu H. Yang L, et al. Among authors: shi m. Nat Commun. 2021 Jun 17;12(1):3708. doi: 10.1038/s41467-021-24044-5. Nat Commun. 2021. PMID: 34140506 Free PMC article.

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