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Simultaneous detection of pathogens and antimicrobial resistance genes with the open source, cloud-based, CZ ID pipeline.
Lu D, Kalantar KL, Chu VT, Glascock AL, Guerrero ES, Bernick N, Butcher X, Ewing K, Fahsbender E, Holmes O, Hoops E, Jones AE, Lim R, McCanny S, Reynoso L, Rosario K, Tang J, Valenzuela O, Mourani PM, Pickering AJ, Raphenya AR, Alcock BP, McArthur AG, Langelier CR. Lu D, et al. Among authors: mourani pm. bioRxiv [Preprint]. 2024 Apr 18:2024.04.12.589250. doi: 10.1101/2024.04.12.589250. bioRxiv. 2024. PMID: 38645206 Free PMC article. Preprint.
Upper airway gene expression reveals a more robust innate and adaptive immune response to SARS-CoV-2 in children compared with older adults.
Mick E, Tsitsiklis A, Spottiswoode N, Caldera S, Serpa PH, Detweiler AM, Neff N, Pisco AO, Li LM, Retallack H, Ratnasiri K, Williamson KM, Soesanto V, Simões EAF, Kistler A, Wagner BD, DeRisi JL, Ambroggio L, Mourani PM, Langelier CR. Mick E, et al. Among authors: mourani pm. Res Sq [Preprint]. 2021 Aug 26:rs.3.rs-784784. doi: 10.21203/rs.3.rs-784784/v1. Res Sq. 2021. Update in: Nat Commun. 2022 Jul 8;13(1):3937. doi: 10.1038/s41467-022-31600-0 PMID: 34462739 Free PMC article. Updated. Preprint.
Temporal airway microbiome changes related to ventilator-associated pneumonia in children.
Mourani PM, Sontag MK, Williamson KM, Harris JK, Reeder R, Locandro C, Carpenter TC, Maddux AB, Ziegler K, Simões EAF, Osborne CM, Ambroggio L, Leroue MK, Robertson CE, Langelier C, DeRisi JL, Kamm J, Hall MW, Zuppa AF, Carcillo J, Meert K, Sapru A, Pollack MM, McQuillen P, Notterman DA, Dean JM, Wagner BD; Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN); Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN) members are as follows:. Mourani PM, et al. Eur Respir J. 2021 Mar 18;57(3):2001829. doi: 10.1183/13993003.01829-2020. Print 2021 Mar. Eur Respir J. 2021. PMID: 33008935 Free PMC article.
Proteomic profiling of the local and systemic immune response to pediatric respiratory viral infections.
Lydon E, Osborne CM, Wagner BD, Ambroggio L, Harris JK, Reeder R, Carpenter TC, Maddux AB, Leroue MK, Yehya N, DeRisi JL, Hall MW, Zuppa AF, Carcillo J, Meert K, Sapru A, Pollack MM, McQuillen P, Notterman DA, Langelier CR, Mourani PM; Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN). Lydon E, et al. Among authors: mourani pm. mSystems. 2024 Nov 29:e0133524. doi: 10.1128/msystems.01335-24. Online ahead of print. mSystems. 2024. PMID: 39611811 Free article.
Publisher Correction: Resuscitation arterial waveform quantification and outcomes in pediatric bidirectional Glenn and Fontan patients.
Yates AR, Hehir DA, Reeder RW, Berger JT, Fernandez R, Frazier AH, Graham K, McQuillen PS, Morgan RW, Nadkarni VM, Naim MY, Palmer CA, Wolfe HA, Berg RA, Sutton RM; ICU-RESUS; Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network Investigator Groups. Yates AR, et al. Pediatr Res. 2024 Nov 26. doi: 10.1038/s41390-024-03749-5. Online ahead of print. Pediatr Res. 2024. PMID: 39592774 No abstract available.
Laboratory validation of a clinical metagenomic next-generation sequencing assay for respiratory virus detection and discovery.
Tan JK, Servellita V, Stryke D, Kelly E, Streithorst J, Sumimoto N, Foresythe A, Huh HJ, Nguyen J, Oseguera M, Brazer N, Tang J, Ingebrigtsen D, Fung B, Reyes H, Hillberg M, Chen A, Guevara H, Yagi S, Morales C, Wadford DA, Mourani PM, Langelier CR, de Lorenzi-Tognon M, Benoit P, Chiu CY. Tan JK, et al. Among authors: mourani pm. Nat Commun. 2024 Nov 12;15(1):9016. doi: 10.1038/s41467-024-51470-y. Nat Commun. 2024. PMID: 39532844 Free PMC article.
Microbial dynamics and pulmonary immune responses in COVID-19 secondary bacterial pneumonia.
Spottiswoode N, Tsitsiklis A, Chu VT, Phan HV, DeVoe C, Love C, Ghale R, Bloomstein J, Zha BS, Maguire CP, Glascock A, Sarma A, Mourani PM, Kalantar KL, Detweiler A, Neff N, Haller SC; COMET Consortium; DeRisi JL, Erle DJ, Hendrickson CM, Kangelaris KN, Krummel MF, Matthay MA, Woodruff PG, Calfee CS, Langelier CR. Spottiswoode N, et al. Among authors: mourani pm. Nat Commun. 2024 Oct 29;15(1):9339. doi: 10.1038/s41467-024-53566-x. Nat Commun. 2024. PMID: 39472555 Free PMC article.
Proteomic profiling of the local and systemic immune response to pediatric respiratory viral infections.
Lydon E, Osborne CM, Wagner BD, Ambroggio L, Kirk Harris J, Reeder R, Carpenter TC, Maddux AB, Leroue MK, Yehya N, DeRisi JL, Hall MW, Zuppa AF, Carcillo J, Meert K, Sapru A, Pollack MM, McQuillen P, Notterman DA, Langelier CR, Mourani PM; Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN). Lydon E, et al. Among authors: mourani pm. bioRxiv [Preprint]. 2024 Oct 10:2024.10.08.617294. doi: 10.1101/2024.10.08.617294. bioRxiv. 2024. Update in: mSystems. 2024 Nov 29:e0133524. doi: 10.1128/msystems.01335-24 PMID: 39416167 Free PMC article. Updated. Preprint.
182 results