Smale ST - Search Results

1

Alternative splicing of a chromatin modifier alters the transcriptional regulatory programs of stem cell maintenance and neuronal differentiation.

Nazim M, Lin CH, Feng AC, Xiao W, Yeom KH, Li M, Daly AE, Tan X, Vu H, Ernst J, Carey MF, Smale ST, Black DL. Nazim M, et al. Among authors: smale st. Cell Stem Cell. 2024 May 2;31(5):754-771.e6. doi: 10.1016/j.stem.2024.04.001. Cell Stem Cell. 2024. PMID: 38701759 Free article.

2

Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions.

Bhatt DM, Pandya-Jones A, Tong AJ, Barozzi I, Lissner MM, Natoli G, Black DL, Smale ST. Bhatt DM, et al. Among authors: smale st. Cell. 2012 Jul 20;150(2):279-90. doi: 10.1016/j.cell.2012.05.043. Cell. 2012. PMID: 22817891 Free PMC article.

3

Splicing kinetics and transcript release from the chromatin compartment limit the rate of Lipid A-induced gene expression.

Pandya-Jones A, Bhatt DM, Lin CH, Tong AJ, Smale ST, Black DL. Pandya-Jones A, et al. Among authors: smale st. RNA. 2013 Jun;19(6):811-27. doi: 10.1261/rna.039081.113. Epub 2013 Apr 24. RNA. 2013. PMID: 23616639 Free PMC article.

4

IL-10 Signaling Remodels Adipose Chromatin Architecture to Limit Thermogenesis and Energy Expenditure.

Rajbhandari P, Thomas BJ, Feng AC, Hong C, Wang J, Vergnes L, Sallam T, Wang B, Sandhu J, Seldin MM, Lusis AJ, Fong LG, Katz M, Lee R, Young SG, Reue K, Smale ST, Tontonoz P. Rajbhandari P, et al. Among authors: smale st. Cell. 2018 Jan 11;172(1-2):218-233.e17. doi: 10.1016/j.cell.2017.11.019. Epub 2017 Dec 14. Cell. 2018. PMID: 29249357 Free PMC article.

5

A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling.

Ramirez-Carrozzi VR, Braas D, Bhatt DM, Cheng CS, Hong C, Doty KR, Black JC, Hoffmann A, Carey M, Smale ST. Ramirez-Carrozzi VR, et al. Among authors: smale st. Cell. 2009 Jul 10;138(1):114-28. doi: 10.1016/j.cell.2009.04.020. Cell. 2009. PMID: 19596239 Free PMC article.

6

Identifying cis-acting DNA elements within a control region.

Carey MF, Peterson CL, Smale ST. Carey MF, et al. Among authors: smale st. Cold Spring Harb Protoc. 2012 Mar 1;2012(3):279-96. doi: 10.1101/pdb.top068171. Cold Spring Harb Protoc. 2012. PMID: 22383646 Review.

7

Confirming the functional importance of a protein-DNA interaction.

Carey MF, Peterson CL, Smale ST. Carey MF, et al. Among authors: smale st. Cold Spring Harb Protoc. 2012 Jul 1;2012(7):733-57. doi: 10.1101/pdb.top070060. Cold Spring Harb Protoc. 2012. PMID: 22753608

8

Interferon-mediated reprogramming of membrane cholesterol to evade bacterial toxins.

Zhou QD, Chi X, Lee MS, Hsieh WY, Mkrtchyan JJ, Feng AC, He C, York AG, Bui VL, Kronenberger EB, Ferrari A, Xiao X, Daly AE, Tarling EJ, Damoiseaux R, Scumpia PO, Smale ST, Williams KJ, Tontonoz P, Bensinger SJ. Zhou QD, et al. Among authors: smale st. Nat Immunol. 2020 Jul;21(7):746-755. doi: 10.1038/s41590-020-0695-4. Epub 2020 Jun 8. Nat Immunol. 2020. PMID: 32514064 Free PMC article.

9

Chromatin immunoprecipitation (ChIP).

Carey MF, Peterson CL, Smale ST. Carey MF, et al. Among authors: smale st. Cold Spring Harb Protoc. 2009 Sep;2009(9):pdb.prot5279. doi: 10.1101/pdb.prot5279. Cold Spring Harb Protoc. 2009. PMID: 20147264 No abstract available.

10

Species-Specific Relationships between DNA and Chromatin Properties of CpG Islands in Embryonic Stem Cells and Differentiated Cells.

Langerman J, Lopez D, Pellegrini M, Smale ST. Langerman J, et al. Among authors: smale st. Stem Cell Reports. 2021 Apr 13;16(4):899-912. doi: 10.1016/j.stemcr.2021.02.016. Epub 2021 Mar 25. Stem Cell Reports. 2021. PMID: 33770494 Free PMC article.

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