Murray D - Search Results

1

ZEPPI: Proteome-scale sequence-based evaluation of protein-protein interaction models.

Zhao H, Petrey D, Murray D, Honig B. Zhao H, et al. Among authors: murray d. Proc Natl Acad Sci U S A. 2024 May 21;121(21):e2400260121. doi: 10.1073/pnas.2400260121. Epub 2024 May 14. Proc Natl Acad Sci U S A. 2024. PMID: 38743624 Free PMC article.

2

A computational interactome and functional annotation for the human proteome.

Garzón JI, Deng L, Murray D, Shapira S, Petrey D, Honig B. Garzón JI, et al. Among authors: murray d. Elife. 2016 Oct 22;5:e18715. doi: 10.7554/eLife.18715. Elife. 2016. PMID: 27770567 Free PMC article.

3

Integrating 3D structural information into systems biology.

Murray D, Petrey D, Honig B. Murray D, et al. J Biol Chem. 2021 Jan-Jun;296:100562. doi: 10.1016/j.jbc.2021.100562. Epub 2021 Mar 18. J Biol Chem. 2021. PMID: 33744294 Free PMC article. Review.

4

Electrostatic control of the membrane targeting of C2 domains.

Murray D, Honig B. Murray D, et al. Mol Cell. 2002 Jan;9(1):145-54. doi: 10.1016/s1097-2765(01)00426-9. Mol Cell. 2002. PMID: 11804593 Free article.

5

Helical packing patterns in membrane and soluble proteins.

Gimpelev M, Forrest LR, Murray D, Honig B. Gimpelev M, et al. Among authors: murray d. Biophys J. 2004 Dec;87(6):4075-86. doi: 10.1529/biophysj.104.049288. Epub 2004 Oct 1. Biophys J. 2004. PMID: 15465852 Free PMC article.

6

High-throughput computational structure-based characterization of protein families: START domains and implications for structural genomics.

Lee H, Li Z, Silkov A, Fischer M, Petrey D, Honig B, Murray D. Lee H, et al. Among authors: murray d. J Struct Funct Genomics. 2010 Mar;11(1):51-9. doi: 10.1007/s10969-010-9086-7. Epub 2010 Apr 11. J Struct Funct Genomics. 2010. PMID: 20383749 Free PMC article.

7

The role of electrostatic interactions in the regulation of the membrane association of G protein beta gamma heterodimers.

Murray D, McLaughlin S, Honig B. Murray D, et al. J Biol Chem. 2001 Nov 30;276(48):45153-9. doi: 10.1074/jbc.M101784200. Epub 2001 Sep 13. J Biol Chem. 2001. PMID: 11557749 Free article.

8

Oncoprotein-specific molecular interaction maps (SigMaps) for cancer network analyses.

Broyde J, Simpson DR, Murray D, Paull EO, Chu BW, Tagore S, Jones SJ, Griffin AT, Giorgi FM, Lachmann A, Jackson P, Sweet-Cordero EA, Honig B, Califano A. Broyde J, et al. Among authors: murray d. Nat Biotechnol. 2021 Feb;39(2):215-224. doi: 10.1038/s41587-020-0652-7. Epub 2020 Sep 14. Nat Biotechnol. 2021. PMID: 32929263 Free PMC article.

9

To B or not to B: PIP2 answers the question.

Murray D, Honig B. Murray D, et al. Dev Cell. 2005 Feb;8(2):138-9. doi: 10.1016/j.devcel.2005.01.002. Dev Cell. 2005. PMID: 15691756 Free article.

10

Retroviral matrix domains share electrostatic homology: models for membrane binding function throughout the viral life cycle.

Murray PS, Li Z, Wang J, Tang CL, Honig B, Murray D. Murray PS, et al. Among authors: murray d. Structure. 2005 Oct;13(10):1521-31. doi: 10.1016/j.str.2005.07.010. Structure. 2005. PMID: 16216583 Free article.

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