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Page 1
Next-generation IEDB tools: a platform for epitope prediction and analysis.
Yan Z, Kim K, Kim H, Ha B, Gambiez A, Bennett J, de Almeida Mendes MF, Trevizani R, Mahita J, Richardson E, Marrama D, Blazeska N, Koşaloğlu-Yalçın Z, Nielsen M, Sette A, Peters B, Greenbaum JA. Yan Z, et al. Among authors: marrama d. Nucleic Acids Res. 2024 Jul 5;52(W1):W526-W532. doi: 10.1093/nar/gkae407. Nucleic Acids Res. 2024. PMID: 38783079 Free PMC article.
Genome-wide characterization of T cell responses to Bordetella pertussis reveals broad reactivity and similar polarization irrespective of childhood vaccination profiles.
da Silva Antunes R, Garrigan E, Quiambao LG, Dhanda SK, Marrama D, Westernberg L, Wang E, Sutherland A, Armstrong SK, Brickman TJ, Sidney J, Frazier A, Merkel T, Peters B, Sette A. da Silva Antunes R, et al. Among authors: marrama d. bioRxiv [Preprint]. 2023 Mar 25:2023.03.24.534182. doi: 10.1101/2023.03.24.534182. bioRxiv. 2023. PMID: 36993748 Free PMC article. Preprint.
The Immune Epitope Database (IEDB): 2024 update.
Vita R, Blazeska N, Marrama D; IEDB Curation Team Members; Duesing S, Bennett J, Greenbaum J, De Almeida Mendes M, Mahita J, Wheeler DK, Cantrell JR, Overton JA, Natale DA, Sette A, Peters B. Vita R, et al. Among authors: marrama d. Nucleic Acids Res. 2024 Nov 18:gkae1092. doi: 10.1093/nar/gkae1092. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39558162
T cell reactivity to Bordetella pertussis is highly diverse regardless of childhood vaccination.
da Silva Antunes R, Garrigan E, Quiambao LG, Dhanda SK, Marrama D, Westernberg L, Wang E, Abawi A, Sutherland A, Armstrong SK, Brickman TJ, Sidney J, Frazier A, Merkel TJ, Peters B, Sette A. da Silva Antunes R, et al. Among authors: marrama d. Cell Host Microbe. 2023 Aug 9;31(8):1404-1416.e4. doi: 10.1016/j.chom.2023.06.015. Epub 2023 Jul 24. Cell Host Microbe. 2023. PMID: 37490913 Free PMC article.
Immunodominant MHC-II (Major Histocompatibility Complex II) Restricted Epitopes in Human Apolipoprotein B.
Roy P, Sidney J, Lindestam Arlehamn CS, Phillips E, Mallal S, Armstrong Suthahar SS, Billitti M, Rubiro P, Marrama D, Drago F, Vallejo J, Suryawanshi V, Orecchioni M, Makings J, Kim PJ, McNamara CA, Peters B, Sette A, Ley K. Roy P, et al. Among authors: marrama d. Circ Res. 2022 Jul 22;131(3):258-276. doi: 10.1161/CIRCRESAHA.122.321116. Epub 2022 Jun 29. Circ Res. 2022. PMID: 35766025 Free PMC article.
Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals.
Grifoni A, Weiskopf D, Ramirez SI, Mateus J, Dan JM, Moderbacher CR, Rawlings SA, Sutherland A, Premkumar L, Jadi RS, Marrama D, de Silva AM, Frazier A, Carlin AF, Greenbaum JA, Peters B, Krammer F, Smith DM, Crotty S, Sette A. Grifoni A, et al. Among authors: marrama d. Cell. 2020 Jun 25;181(7):1489-1501.e15. doi: 10.1016/j.cell.2020.05.015. Epub 2020 May 20. Cell. 2020. PMID: 32473127 Free PMC article.
22 results