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Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial.
Hogg CJ, Edwards RJ, Farquharson KA, Silver LW, Brandies P, Peel E, Escalona M, Jaya FR, Thavornkanlapachai R, Batley K, Bradford TM, Chang JK, Chen Z, Deshpande N, Dziminski M, Ewart KM, Griffith OW, Marin Gual L, Moon KL, Travouillon KJ, Waters P, Whittington CM, Wilkins MR, Helgen KM, Lo N, Ho SYW, Ruiz Herrera A, Paltridge R, Marshall Graves JA, Renfree M, Shapiro B, Ottewell K; Kiwirrkurra Rangers; Belov K. Hogg CJ, et al. Among authors: shapiro b. Nat Ecol Evol. 2024 Jul;8(7):1311-1326. doi: 10.1038/s41559-024-02436-2. Epub 2024 Jul 1. Nat Ecol Evol. 2024. PMID: 38945974 Free PMC article.
Author Correction: Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial.
Hogg CJ, Edwards RJ, Farquharson KA, Silver LW, Brandies P, Peel E, Escalona M, Jaya FR, Thavornkanlapachai R, Batley K, Bradford TM, Chang JK, Chen Z, Deshpande N, Dziminski M, Ewart KM, Griffith OW, Marin Gual L, Moon KL, Travouillon KJ, Waters P, Whittington CM, Wilkins MR, Helgen KM, Lo N, Ho SYW, Ruiz Herrera A, Paltridge R, Marshall Graves JA, Renfree M, Shapiro B, Ottewell K; Kiwirrkurra Rangers; Belov K. Hogg CJ, et al. Among authors: shapiro b. Nat Ecol Evol. 2024 Sep;8(9):1776. doi: 10.1038/s41559-024-02519-0. Nat Ecol Evol. 2024. PMID: 39075174 Free PMC article. No abstract available.
Widespread horse-based mobility arose around 2200 BCE in Eurasia.
Librado P, Tressières G, Chauvey L, Fages A, Khan N, Schiavinato S, Calvière-Tonasso L, Kusliy MA, Gaunitz C, Liu X, Wagner S, Der Sarkissian C, Seguin-Orlando A, Perdereau A, Aury JM, Southon J, Shapiro B, Bouchez O, Donnadieu C, Collin YRH, Gregersen KM, Jessen MD, Christensen K, Claudi-Hansen L, Pruvost M, Pucher E, Vulic H, Novak M, Rimpf A, Turk P, Reiter S, Brem G, Schwall C, Barrey É, Robert C, Degueurce C, Horwitz LK, Klassen L, Rasmussen U, Kveiborg J, Johannsen NN, Makowiecki D, Makarowicz P, Szeliga M, Ilchyshyn V, Rud V, Romaniszyn J, Mullin VE, Verdugo M, Bradley DG, Cardoso JL, Valente MJ, Telles Antunes M, Ameen C, Thomas R, Ludwig A, Marzullo M, Prato O, Bagnasco Gianni G, Tecchiati U, Granado J, Schlumbaum A, Deschler-Erb S, Mráz MS, Boulbes N, Gardeisen A, Mayer C, Döhle HJ, Vicze M, Kosintsev PA, Kyselý R, Peške L, O'Connor T, Ananyevskaya E, Shevnina I, Logvin A, Kovalev AA, Iderkhangai TO, Sablin MV, Dashkovskiy PK, Graphodatsky AS, Merts I, Merts V, Kasparov AK, Pitulko VV, Onar V, Öztan A, Arbuckle BS, McColl H, Renaud G, Khaskhanov R, Demidenko S, Kadieva A, Atabiev B, Sundqvist M, Lindgren G, López-Cachero FJ, Albizuri S, Trbojević Vukičević T, Rapa… See abstract for full author list ➔ Librado P, et al. Among authors: shapiro b. Nature. 2024 Jul;631(8022):819-825. doi: 10.1038/s41586-024-07597-5. Epub 2024 Jun 6. Nature. 2024. PMID: 38843826 Free PMC article.
A chromosome-level genome assembly of the mountain lion, Puma concolor.
Supple MA, Escalona M, Alexandre N, Buchalski MR, Riley SPD, Dellinger JA, Vickers TW, Sahasrabudhe R, Nguyen O, Fairbairn CW, Seligmann WE, Wilmers CC, Shapiro B. Supple MA, et al. Among authors: shapiro b. J Hered. 2024 Nov 7:esae063. doi: 10.1093/jhered/esae063. Online ahead of print. J Hered. 2024. PMID: 39506490
The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology.
Gill EE, Jia B, Murall CL, Poujol R, Anwar MZ, John NS, Richardsson J, Hobb A, Olabode AS, Lepsa A, Duggan AT, Tyler AD, N'Guessan A, Kachru A, Chan B, Yoshida C, Yung CK, Bujold D, Andric D, Su E, Griffiths EJ, Van Domselaar G, Jolly GW, Ward HKE, Feher H, Baker J, Simpson JT, Uddin J, Ragoussis J, Eubank J, Fritz JH, Gálvez JH, Fang K, Cullion K, Rivera L, Xiang L, Croxen MA, Shiell M, Prystajecky N, Quirion PO, Bajari R, Rich S, Mubareka S, Moreira S, Cain S, Sutcliffe SG, Kraemer SA, Alturmessov Y, Joly Y, Cphln Consortium, CanCOGeN Consortium, VirusSeq Data Portal Academic And Health Network, Fiume M, Snutch TP, Bell C, Lopez-Correa C, Hussin JG, Joy JB, Colijn C, Gordon PMK, Hsiao WWL, Poon AFY, Knox NC, Courtot M, Stein L, Otto SP, Bourque G, Shapiro BJ, Brinkman FSL. Gill EE, et al. Among authors: shapiro bj. Microb Genom. 2024 Oct;10(10):001293. doi: 10.1099/mgen.0.001293. Microb Genom. 2024. PMID: 39401061 Free PMC article.
Combining Short- and Long-Read Sequencing Technologies to Identify SARS-CoV-2 Variants in Wastewater.
Jayme G, Liu JL, Galvez JH, Reiling SJ, Celikkol S, N'Guessan A, Lee S, Chen SH, Tsitouras A, Sanchez-Quete F, Maere T, Goitom E, Hachad M, Mercier E, Loeb SK, Vanrolleghem PA, Dorner S, Delatolla R, Shapiro BJ, Frigon D, Ragoussis J, Snutch TP. Jayme G, et al. Among authors: shapiro bj. Viruses. 2024 Sep 21;16(9):1495. doi: 10.3390/v16091495. Viruses. 2024. PMID: 39339971 Free PMC article.
Genome-wide population affinities and signatures of adaptation in hydruntines, sussemiones and Asian wild asses.
Pan J, Liu X, Baca M, Calvière-Tonasso L, Schiavinato S, Chauvey L, Tressières G, Perdereau A, Aury JM, Oliveira PH, Wincker P, Abdykanova A, Arsuaga JL, Bayarsaikhan J, Belinskiy AB, Carbonell E, Davoudi H, Lira Garrido J, Gilbert AS, Hermes T, Warinner C, Kalmykov AA, Lordkipanidze D, Mackiewicz P, Mohaseb AF, Richter K, Sayfullaev N, Shapiro B, Shnaider S, Southon J, Stefaniak K, Summers GD, van Asperen EN, Vanishvili N, Hill EA, Kuznetsov P, Reinhold S, Hansen S, Mashkour M, Berthon R, Taylor WTT, Houle JL, Hekkala E, Popović D, Orlando L. Pan J, et al. Among authors: shapiro b. Mol Ecol. 2024 Oct;33(19):e17527. doi: 10.1111/mec.17527. Epub 2024 Sep 16. Mol Ecol. 2024. PMID: 39279684
1,932 results