Volynsky P - Search Results

1

TriplEP-CPP: Algorithm for Predicting the Properties of Peptide Sequences.

Serebrennikova M, Grafskaia E, Maltsev D, Ivanova K, Bashkirov P, Kornilov F, Volynsky P, Efremov R, Bocharov E, Lazarev V. Serebrennikova M, et al. Among authors: volynsky p. Int J Mol Sci. 2024 Jun 22;25(13):6869. doi: 10.3390/ijms25136869. Int J Mol Sci. 2024. PMID: 38999985 Free PMC article.

2

Structural, dynamic, and functional aspects of helix association in membranes: a computational view.

Polyansky AA, Volynsky PE, Efremov RG. Polyansky AA, et al. Adv Protein Chem Struct Biol. 2011;83:129-61. doi: 10.1016/B978-0-12-381262-9.00004-5. Adv Protein Chem Struct Biol. 2011. PMID: 21570667 Review.

3

Adaptation of a membrane-active peptide to heterogeneous environment. I. Structural plasticity of the peptide.

Polyansky AA, Volynsky PE, Arseniev AS, Efremov RG. Polyansky AA, et al. J Phys Chem B. 2009 Jan 29;113(4):1107-19. doi: 10.1021/jp803640e. J Phys Chem B. 2009. PMID: 19125640

4

Structure elucidation of dimeric transmembrane domains of bitopic proteins.

Bocharov EV, Volynsky PE, Pavlov KV, Efremov RG, Arseniev AS. Bocharov EV, et al. Cell Adh Migr. 2010 Apr-Jun;4(2):284-98. doi: 10.4161/cam.4.2.11930. Epub 2010 May 1. Cell Adh Migr. 2010. PMID: 20421711 Free PMC article. Review.

5

Role of dimerization efficiency of transmembrane domains in activation of fibroblast growth factor receptor 3.

Volynsky PE, Polyansky AA, Fakhrutdinova GN, Bocharov EV, Efremov RG. Volynsky PE, et al. J Am Chem Soc. 2013 Jun 5;135(22):8105-8. doi: 10.1021/ja4011942. Epub 2013 May 23. J Am Chem Soc. 2013. PMID: 23679838

6

Spatial structure and activity mechanism of a novel spider antimicrobial peptide.

Dubovskii PV, Volynsky PE, Polyansky AA, Chupin VV, Efremov RG, Arseniev AS. Dubovskii PV, et al. Biochemistry. 2006 Sep 5;45(35):10759-67. doi: 10.1021/bi060635w. Biochemistry. 2006. PMID: 16939228

7

Effect of lipid composition on the "membrane response" induced by a fusion peptide.

Volynsky PE, Polyansky AA, Simakov NA, Arseniev AS, Efremov RG. Volynsky PE, et al. Biochemistry. 2005 Nov 8;44(44):14626-37. doi: 10.1021/bi0514562. Biochemistry. 2005. PMID: 16262262

8

Computer simulations of membrane-lytic peptides: perspectives in drug design.

Polyansky AA, Volynsky PE, Efremov RG. Polyansky AA, et al. J Bioinform Comput Biol. 2007 Apr;5(2B):611-26. doi: 10.1142/s0219720007002783. J Bioinform Comput Biol. 2007. PMID: 17636865

9

The membrane-proximal fusion domain of HIV-1 GP41 reveals sequence-specific and fine-tuning mechanism of membrane binding.

Efremov RG, Volynsky PE, Nolde DE, Vergoten G, Arseniev AS. Efremov RG, et al. J Biomol Struct Dyn. 2007 Oct;25(2):195-205. doi: 10.1080/07391102.2007.10507169. J Biomol Struct Dyn. 2007. PMID: 17718599

10

Spatial structure of the dimeric transmembrane domain of the growth factor receptor ErbB2 presumably corresponding to the receptor active state.

Bocharov EV, Mineev KS, Volynsky PE, Ermolyuk YS, Tkach EN, Sobol AG, Chupin VV, Kirpichnikov MP, Efremov RG, Arseniev AS. Bocharov EV, et al. Among authors: volynsky pe. J Biol Chem. 2008 Mar 14;283(11):6950-6. doi: 10.1074/jbc.M709202200. Epub 2008 Jan 4. J Biol Chem. 2008. PMID: 18178548 Free article.

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