Bloom JD - Search Results

1

Age-dependent heterogeneity in the antigenic effects of mutations to influenza hemagglutinin.

Welsh FC, Eguia RT, Lee JM, Haddox HK, Galloway J, Van Vinh Chau N, Loes AN, Huddleston J, Yu TC, Quynh Le M, Nhat NTD, Thi Le Thanh N, Greninger AL, Chu HY, Englund JA, Bedford T, Matsen FA 4th, Boni MF, Bloom JD. Welsh FC, et al. Among authors: bloom jd. Cell Host Microbe. 2024 Aug 14;32(8):1397-1411.e11. doi: 10.1016/j.chom.2024.06.015. Epub 2024 Jul 19. Cell Host Microbe. 2024. PMID: 39032493 Free article.

2

The inherent mutational tolerance and antigenic evolvability of influenza hemagglutinin.

Thyagarajan B, Bloom JD. Thyagarajan B, et al. Among authors: bloom jd. Elife. 2014 Jul 8;3:e03300. doi: 10.7554/eLife.03300. Elife. 2014. PMID: 25006036 Free PMC article.

3

Positive Selection in CD8+ T-Cell Epitopes of Influenza Virus Nucleoprotein Revealed by a Comparative Analysis of Human and Swine Viral Lineages.

Machkovech HM, Bedford T, Suchard MA, Bloom JD. Machkovech HM, et al. Among authors: bloom jd. J Virol. 2015 Nov;89(22):11275-83. doi: 10.1128/JVI.01571-15. Epub 2015 Aug 26. J Virol. 2015. PMID: 26311880 Free PMC article.

4

Accurate Measurement of the Effects of All Amino-Acid Mutations on Influenza Hemagglutinin.

Doud MB, Bloom JD. Doud MB, et al. Among authors: bloom jd. Viruses. 2016 Jun 3;8(6):155. doi: 10.3390/v8060155. Viruses. 2016. PMID: 27271655 Free PMC article.

5

Experimental Estimation of the Effects of All Amino-Acid Mutations to HIV's Envelope Protein on Viral Replication in Cell Culture.

Haddox HK, Dingens AS, Bloom JD. Haddox HK, et al. Among authors: bloom jd. PLoS Pathog. 2016 Dec 13;12(12):e1006114. doi: 10.1371/journal.ppat.1006114. eCollection 2016 Dec. PLoS Pathog. 2016. PMID: 27959955 Free PMC article.

6

Comprehensive Mapping of HIV-1 Escape from a Broadly Neutralizing Antibody.

Dingens AS, Haddox HK, Overbaugh J, Bloom JD. Dingens AS, et al. Among authors: bloom jd. Cell Host Microbe. 2017 Jun 14;21(6):777-787.e4. doi: 10.1016/j.chom.2017.05.003. Epub 2017 Jun 1. Cell Host Microbe. 2017. PMID: 28579254 Free PMC article.

7

Parallel evolution of influenza across multiple spatiotemporal scales.

Xue KS, Stevens-Ayers T, Campbell AP, Englund JA, Pergam SA, Boeckh M, Bloom JD. Xue KS, et al. Among authors: bloom jd. Elife. 2017 Jun 27;6:e26875. doi: 10.7554/eLife.26875. Elife. 2017. PMID: 28653624 Free PMC article.

8

Cooperating H3N2 Influenza Virus Variants Are Not Detectable in Primary Clinical Samples.

Xue KS, Greninger AL, Pérez-Osorio A, Bloom JD. Xue KS, et al. Among authors: bloom jd. mSphere. 2018 Jan 3;3(1):e00552-17. doi: 10.1128/mSphereDirect.00552-17. eCollection 2018 Jan-Feb. mSphere. 2018. PMID: 29299533 Free PMC article.

9

Within-Host Evolution of Human Influenza Virus.

Xue KS, Moncla LH, Bedford T, Bloom JD. Xue KS, et al. Among authors: bloom jd. Trends Microbiol. 2018 Sep;26(9):781-793. doi: 10.1016/j.tim.2018.02.007. Epub 2018 Mar 10. Trends Microbiol. 2018. PMID: 29534854 Free PMC article. Review.

10

Mapping mutational effects along the evolutionary landscape of HIV envelope.

Haddox HK, Dingens AS, Hilton SK, Overbaugh J, Bloom JD. Haddox HK, et al. Among authors: bloom jd. Elife. 2018 Mar 28;7:e34420. doi: 10.7554/eLife.34420. Elife. 2018. PMID: 29590010 Free PMC article.

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