West PT - Search Results

1

Intragenic DNA inversions expand bacterial coding capacity.

Chanin RB, West PT, Wirbel J, Gill MO, Green GZM, Park RM, Enright N, Miklos AM, Hickey AS, Brooks EF, Lum KK, Cristea IM, Bhatt AS. Chanin RB, et al. Among authors: west pt. Nature. 2024 Oct;634(8032):234-242. doi: 10.1038/s41586-024-07970-4. Epub 2024 Sep 25. Nature. 2024. PMID: 39322669

2

Intragenic DNA inversions expand bacterial coding capacity.

Chanin RB, West PT, Park RM, Wirbel J, Green GZM, Miklos AM, Gill MO, Hickey AS, Brooks EF, Bhatt AS. Chanin RB, et al. Among authors: west pt. bioRxiv [Preprint]. 2023 Sep 16:2023.03.11.532203. doi: 10.1101/2023.03.11.532203. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):234-242. doi: 10.1038/s41586-024-07970-4 PMID: 36945655 Free PMC article. Updated. Preprint.

3

A large colonial choanoflagellate from Mono Lake harbors live bacteria.

Hake KH, West PT, McDonald K, Laundon D, Reyes-Rivera J, Garcia De Las Bayonas A, Feng C, Burkhardt P, Richter DJ, Banfield JF, King N. Hake KH, et al. Among authors: west pt. mBio. 2024 Sep 11;15(9):e0162324. doi: 10.1128/mbio.01623-24. Epub 2024 Aug 14. mBio. 2024. PMID: 39140743 Free PMC article.

4

Biophysical characterization of microbial rhodopsins with DSE motif.

Marín MDC, Jaffe AL, West PT, Konno M, Banfield JF, Inoue K. Marín MDC, et al. Among authors: west pt. Biophys Physicobiol. 2023 Mar 8;20(Supplemental):e201023. doi: 10.2142/biophysico.bppb-v20.s023. eCollection 2023 Mar 21. Biophys Physicobiol. 2023. PMID: 38362324 Free PMC article.

5

Metabolic diversity in commensal protists regulates intestinal immunity and trans-kingdom competition.

Gerrick ER, Zlitni S, West PT, Carter MM, Mechler CM, Olm MR, Caffrey EB, Li JA, Higginbottom SK, Severyn CJ, Kracke F, Spormann AM, Sonnenburg JL, Bhatt AS, Howitt MR. Gerrick ER, et al. Among authors: west pt. Cell. 2024 Jan 4;187(1):62-78.e20. doi: 10.1016/j.cell.2023.11.018. Epub 2023 Dec 13. Cell. 2024. PMID: 38096822

6

From genome structure to function: insights into structural variation in microbiology.

West PT, Chanin RB, Bhatt AS. West PT, et al. Curr Opin Microbiol. 2022 Oct;69:102192. doi: 10.1016/j.mib.2022.102192. Epub 2022 Aug 26. Curr Opin Microbiol. 2022. PMID: 36030622 Free PMC article. Review.

7

Near-fatal Legionella pneumonia in a neonate linked to home humidifier by metagenomic next generation sequencing.

West PT, Brooks EF, Costales C, Moreno A, Jensen TD, Budvytiene I, Khan A, Pham THM, Schwenk HT, Bhatt AS, Banaei N. West PT, et al. Med. 2022 Aug 12;3(8):565-567. doi: 10.1016/j.medj.2022.06.004. Epub 2022 Jul 20. Med. 2022. PMID: 35863347 Free PMC article. No abstract available.

8

Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria.

Jaffe AL, Thomas AD, He C, Keren R, Valentin-Alvarado LE, Munk P, Bouma-Gregson K, Farag IF, Amano Y, Sachdeva R, West PT, Banfield JF. Jaffe AL, et al. Among authors: west pt. mBio. 2021 Aug 31;12(4):e0052121. doi: 10.1128/mBio.00521-21. Epub 2021 Jul 13. mBio. 2021. PMID: 34253055 Free PMC article.

9

Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics.

West PT, Peters SL, Olm MR, Yu FB, Gause H, Lou YC, Firek BA, Baker R, Johnson AD, Morowitz MJ, Hettich RL, Banfield JF. West PT, et al. Microbiome. 2021 Jun 21;9(1):142. doi: 10.1186/s40168-021-01085-y. Microbiome. 2021. PMID: 34154658 Free PMC article.

10

Genome-resolved metagenomics of eukaryotic populations during early colonization of premature infants and in hospital rooms.

Olm MR, West PT, Brooks B, Firek BA, Baker R, Morowitz MJ, Banfield JF. Olm MR, et al. Among authors: west pt. Microbiome. 2019 Feb 15;7(1):26. doi: 10.1186/s40168-019-0638-1. Microbiome. 2019. PMID: 30770768 Free PMC article.

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