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Cross-species single-cell spatial transcriptomic atlases of the cerebellar cortex.
Hao S, Zhu X, Huang Z, Yang Q, Liu H, Wu Y, Zhan Y, Dong Y, Li C, Wang H, Haasdijk E, Wu Z, Li S, Yan H, Zhu L, Guo S, Wang Z, Ye A, Lin Y, Cui L, Tan X, Liu H, Wang M, Chen J, Zhong Y, Du W, Wang G, Lai T, Cao M, Yang T, Xu Y, Li L, Yu Q, Zhuang Z, Xia Y, Lei Y, An Y, Cheng M, Zhao Y, Han L, Yuan Y, Song X, Song Y, Gu L, Liu C, Lin X, Wang R, Wang Z, Wang Y, Li S, Li H, Song J, Chen M, Zhou W, Yuan N, Sun S, Wang S, Chen Y, Zheng M, Fang J, Zhang R, Zhang S, Chai Q, Liu J, Wei W, He J, Zhou H, Sun Y, Liu Z, Liu C, Yao J, Liang Z, Xu X, Poo M, Li C, De Zeeuw CI, Shen Z, Liu Z, Liu L, Liu S, Sun Y, Liu C. Hao S, et al. Among authors: li c, li s, li h, li l. Science. 2024 Sep 27;385(6716):eado3927. doi: 10.1126/science.ado3927. Epub 2024 Sep 27. Science. 2024. PMID: 39325889
A spatiotemporal atlas of mouse liver homeostasis and regeneration.
Xu J, Guo P, Hao S, Shangguan S, Shi Q, Volpe G, Huang K, Zuo J, An J, Yuan Y, Cheng M, Deng Q, Zhang X, Lai G, Nan H, Wu B, Shentu X, Wu L, Wei X, Jiang Y, Huang X, Pan F, Song Y, Li R, Wang Z, Liu C, Liu S, Li Y, Yang T, Xu Z, Du W, Li L, Ahmed T, You K, Dai Z, Li L, Qin B, Li Y, Lai L, Qin D, Chen J, Fan R, Li Y, Hou J, Ott M, Sharma AD, Cantz T, Schambach A, Kristiansen K, Hutchins AP, Göttgens B, Maxwell PH, Hui L, Xu X, Liu L, Chen A, Lai Y, Esteban MA. Xu J, et al. Among authors: li y, li l, li r. Nat Genet. 2024 May;56(5):953-969. doi: 10.1038/s41588-024-01709-7. Epub 2024 Apr 16. Nat Genet. 2024. PMID: 38627598
CDCP: a visualization and analyzing platform for single-cell datasets.
Li Y, Yang T, Lai T, You L, Yang F, Qiu J, Wang L, Du W, Hua C, Xu Z, Cai J, Li Z, Liu Y, Li L, Zhang M, Chen J, Zhang L, Chen D, Wang W, Liu S, Wu L, Zeng W, Wang B, Wei X, Liu L, Chen F. Li Y, et al. Among authors: li z, li l. J Genet Genomics. 2022 Jul;49(7):689-692. doi: 10.1016/j.jgg.2021.12.004. Epub 2021 Dec 29. J Genet Genomics. 2022. PMID: 34973426 No abstract available.
STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization.
Xu Z, Wang W, Yang T, Li L, Ma X, Chen J, Wang J, Huang Y, Gould J, Lu H, Du W, Sahu SK, Yang F, Li Z, Hu Q, Hua C, Hu S, Liu Y, Cai J, You L, Zhang Y, Li Y, Zeng W, Chen A, Wang B, Liu L, Chen F, Ma K, Xu X, Wei X. Xu Z, et al. Among authors: li y, li z, li l. Nucleic Acids Res. 2024 Jan 5;52(D1):D1053-D1061. doi: 10.1093/nar/gkad933. Nucleic Acids Res. 2024. PMID: 37953328 Free PMC article.
CNSA: a data repository for archiving omics data.
Guo X, Chen F, Gao F, Li L, Liu K, You L, Hua C, Yang F, Liu W, Peng C, Wang L, Yang X, Zhou F, Tong J, Cai J, Li Z, Wan B, Zhang L, Yang T, Zhang M, Yang L, Yang Y, Zeng W, Wang B, Wei X, Xu X. Guo X, et al. Among authors: li z, li l. Database (Oxford). 2020 Jan 1;2020:baaa055. doi: 10.1093/database/baaa055. Database (Oxford). 2020. PMID: 32705130 Free PMC article.
Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP).
Carpenter EJ, Matasci N, Ayyampalayam S, Wu S, Sun J, Yu J, Jimenez Vieira FR, Bowler C, Dorrell RG, Gitzendanner MA, Li L, Du W, K Ullrich K, Wickett NJ, Barkmann TJ, Barker MS, Leebens-Mack JH, Wong GK. Carpenter EJ, et al. Among authors: li l. Gigascience. 2019 Oct 1;8(10):giz126. doi: 10.1093/gigascience/giz126. Gigascience. 2019. PMID: 31644802 Free PMC article.
Corrigendum to "PGE2 protects against heart failure through inhibiting TGF-β1 synthesis in cardiomyocytes and crosstalk between TGF-β1 and GRK2" [Journal of Molecular and Cellular Cardiology. 172(2022) 63-77].
Fu J, Li L, Chen L, Su C, Feng X, Huang K, Zhang L, Yang X, Fu Q. Fu J, et al. Among authors: li l. J Mol Cell Cardiol. 2024 Nov 22:S0022-2828(24)00191-3. doi: 10.1016/j.yjmcc.2024.11.003. Online ahead of print. J Mol Cell Cardiol. 2024. PMID: 39580349 No abstract available.
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