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Cross-species single-cell spatial transcriptomic atlases of the cerebellar cortex.
Hao S, Zhu X, Huang Z, Yang Q, Liu H, Wu Y, Zhan Y, Dong Y, Li C, Wang H, Haasdijk E, Wu Z, Li S, Yan H, Zhu L, Guo S, Wang Z, Ye A, Lin Y, Cui L, Tan X, Liu H, Wang M, Chen J, Zhong Y, Du W, Wang G, Lai T, Cao M, Yang T, Xu Y, Li L, Yu Q, Zhuang Z, Xia Y, Lei Y, An Y, Cheng M, Zhao Y, Han L, Yuan Y, Song X, Song Y, Gu L, Liu C, Lin X, Wang R, Wang Z, Wang Y, Li S, Li H, Song J, Chen M, Zhou W, Yuan N, Sun S, Wang S, Chen Y, Zheng M, Fang J, Zhang R, Zhang S, Chai Q, Liu J, Wei W, He J, Zhou H, Sun Y, Liu Z, Liu C, Yao J, Liang Z, Xu X, Poo M, Li C, De Zeeuw CI, Shen Z, Liu Z, Liu L, Liu S, Sun Y, Liu C. Hao S, et al. Among authors: liu j, liu z, liu h, liu l, liu c, liu s. Science. 2024 Sep 27;385(6716):eado3927. doi: 10.1126/science.ado3927. Epub 2024 Sep 27. Science. 2024. PMID: 39325889
Cell transcriptomic atlas of the non-human primate Macaca fascicularis.
Han L, Wei X, Liu C, Volpe G, Zhuang Z, Zou X, Wang Z, Pan T, Yuan Y, Zhang X, Fan P, Guo P, Lai Y, Lei Y, Liu X, Yu F, Shangguan S, Lai G, Deng Q, Liu Y, Wu L, Shi Q, Yu H, Huang Y, Cheng M, Xu J, Liu Y, Wang M, Wang C, Zhang Y, Xie D, Yang Y, Yu Y, Zheng H, Wei Y, Huang F, Lei J, Huang W, Zhu Z, Lu H, Wang B, Wei X, Chen F, Yang T, Du W, Chen J, Xu S, An J, Ward C, Wang Z, Pei Z, Wong CW, Liu X, Zhang H, Liu M, Qin B, Schambach A, Isern J, Feng L, Liu Y, Guo X, Liu Z, Sun Q, Maxwell PH, Barker N, Muñoz-Cánoves P, Gu Y, Mulder J, Uhlen M, Tan T, Liu S, Yang H, Wang J, Hou Y, Xu X, Esteban MA, Liu L. Han L, et al. Among authors: liu z, liu y, liu x, liu m, liu l, liu c, liu s. Nature. 2022 Apr;604(7907):723-731. doi: 10.1038/s41586-022-04587-3. Epub 2022 Apr 13. Nature. 2022. PMID: 35418686
Spatially resolved gene regulatory and disease-related vulnerability map of the adult Macaque cortex.
Lei Y, Cheng M, Li Z, Zhuang Z, Wu L, Sun Y, Han L, Huang Z, Wang Y, Wang Z, Xu L, Yuan Y, Liu S, Pan T, Xie J, Liu C, Volpe G, Ward C, Lai Y, Xu J, Wang M, Yu H, Sun H, Yu Q, Wu L, Wang C, Wong CW, Liu W, Xu L, Wei J, Chen D, Shang Z, Li G, Ma K, Cheng L, Ling F, Tan T, Chen K, Tasic B, Dean M, Ji W, Yang H, Gu Y, Esteban MA, Li Y, Chen A, Niu Y, Zeng H, Hou Y, Liu L, Liu S, Xu X. Lei Y, et al. Among authors: liu l, liu s, liu c, liu w. Nat Commun. 2022 Nov 8;13(1):6747. doi: 10.1038/s41467-022-34413-3. Nat Commun. 2022. PMID: 36347848 Free PMC article.
A spatiotemporal atlas of mouse liver homeostasis and regeneration.
Xu J, Guo P, Hao S, Shangguan S, Shi Q, Volpe G, Huang K, Zuo J, An J, Yuan Y, Cheng M, Deng Q, Zhang X, Lai G, Nan H, Wu B, Shentu X, Wu L, Wei X, Jiang Y, Huang X, Pan F, Song Y, Li R, Wang Z, Liu C, Liu S, Li Y, Yang T, Xu Z, Du W, Li L, Ahmed T, You K, Dai Z, Li L, Qin B, Li Y, Lai L, Qin D, Chen J, Fan R, Li Y, Hou J, Ott M, Sharma AD, Cantz T, Schambach A, Kristiansen K, Hutchins AP, Göttgens B, Maxwell PH, Hui L, Xu X, Liu L, Chen A, Lai Y, Esteban MA. Xu J, et al. Among authors: liu l, liu c, liu s. Nat Genet. 2024 May;56(5):953-969. doi: 10.1038/s41588-024-01709-7. Epub 2024 Apr 16. Nat Genet. 2024. PMID: 38627598
Single cell multi-omics reveal intra-cell-line heterogeneity across human cancer cell lines.
Zhu Q, Zhao X, Zhang Y, Li Y, Liu S, Han J, Sun Z, Wang C, Deng D, Wang S, Tang Y, Huang Y, Jiang S, Tian C, Chen X, Yuan Y, Li Z, Yang T, Lai T, Liu Y, Yang W, Zou X, Zhang M, Cui H, Liu C, Jin X, Hu Y, Chen A, Xu X, Li G, Hou Y, Liu L, Liu S, Fang L, Chen W, Wu L. Zhu Q, et al. Among authors: liu y, liu l, liu s, liu c. Nat Commun. 2023 Dec 9;14(1):8170. doi: 10.1038/s41467-023-43991-9. Nat Commun. 2023. PMID: 38071219 Free PMC article.
Single-cell transcriptomic landscape identifies the expansion of peripheral blood monocytes as an indicator of HIV-1-TB co-infection.
Guo Q, Zhong Y, Wang Z, Cao T, Zhang M, Zhang P, Huang W, Bi J, Yuan Y, Ou M, Zou X, Xiao G, Yang Y, Liu S, Liu L, Wang Z, Zhang G, Wu L. Guo Q, et al. Among authors: liu l, liu s. Cell Insight. 2022 Jan 21;1(1):100005. doi: 10.1016/j.cellin.2022.100005. eCollection 2022 Feb. Cell Insight. 2022. PMID: 37192986 Free PMC article.
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity.
Liu L, Liu C, Quintero A, Wu L, Yuan Y, Wang M, Cheng M, Leng L, Xu L, Dong G, Li R, Liu Y, Wei X, Xu J, Chen X, Lu H, Chen D, Wang Q, Zhou Q, Lin X, Li G, Liu S, Wang Q, Wang H, Fink JL, Gao Z, Liu X, Hou Y, Zhu S, Yang H, Ye Y, Lin G, Chen F, Herrmann C, Eils R, Shang Z, Xu X. Liu L, et al. Among authors: liu y, liu x, liu c, liu s. Nat Commun. 2019 Jan 28;10(1):470. doi: 10.1038/s41467-018-08205-7. Nat Commun. 2019. PMID: 30692544 Free PMC article.
An invasive zone in human liver cancer identified by Stereo-seq promotes hepatocyte-tumor cell crosstalk, local immunosuppression and tumor progression.
Wu L, Yan J, Bai Y, Chen F, Zou X, Xu J, Huang A, Hou L, Zhong Y, Jing Z, Yu Q, Zhou X, Jiang Z, Wang C, Cheng M, Ji Y, Hou Y, Luo R, Li Q, Wu L, Cheng J, Wang P, Guo D, Huang W, Lei J, Liu S, Yan Y, Chen Y, Liao S, Li Y, Sun H, Yao N, Zhang X, Zhang S, Chen X, Yu Y, Li Y, Liu F, Wang Z, Zhou S, Yang H, Yang S, Xu X, Liu L, Gao Q, Tang Z, Wang X, Wang J, Fan J, Liu S, Yang X, Chen A, Zhou J. Wu L, et al. Among authors: liu l, liu s, liu f. Cell Res. 2023 Aug;33(8):585-603. doi: 10.1038/s41422-023-00831-1. Epub 2023 Jun 19. Cell Res. 2023. PMID: 37337030 Free PMC article.
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