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Page 1
Microbiome-metabolite linkages drive greenhouse gas dynamics over a permafrost thaw gradient.
Freire-Zapata V, Holland-Moritz H, Cronin DR, Aroney S, Smith DA, Wilson RM, Ernakovich JG, Woodcroft BJ, Bagby SC; EMERGE 2012 Field Team; EMERGE Biology Integration Coordinators; Rich VI, Sullivan MB, Stegen JC, Tfaily MM. Freire-Zapata V, et al. Nat Microbiol. 2024 Nov;9(11):2892-2908. doi: 10.1038/s41564-024-01800-z. Epub 2024 Oct 1. Nat Microbiol. 2024. PMID: 39354152 Free PMC article.
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle.
McGivern BB, Cronin DR, Ellenbogen JB, Borton MA, Knutson EL, Freire-Zapata V, Bouranis JA, Bernhardt L, Hernandez AI, Flynn RM, Woyda R, Cory AB, Wilson RM, Chanton JP, Woodcroft BJ, Ernakovich JG, Tfaily MM, Sullivan MB, Tyson GW, Rich VI, Hagerman AE, Wrighton KC. McGivern BB, et al. Among authors: freire zapata v. Nat Microbiol. 2024 Jun;9(6):1454-1466. doi: 10.1038/s41564-024-01691-0. Epub 2024 May 28. Nat Microbiol. 2024. PMID: 38806673 Free PMC article.
Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost.
Ellenbogen JB, Borton MA, McGivern BB, Cronin DR, Hoyt DW, Freire-Zapata V, McCalley CK, Varner RK, Crill PM, Wehr RA, Chanton JP, Woodcroft BJ, Tfaily MM, Tyson GW, Rich VI, Wrighton KC. Ellenbogen JB, et al. Among authors: freire zapata v. mSystems. 2024 Jan 23;9(1):e0069823. doi: 10.1128/msystems.00698-23. Epub 2023 Dec 8. mSystems. 2024. PMID: 38063415 Free PMC article.
Author Correction: Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest.
Honeker LK, Pugliese G, Ingrisch J, Fudyma J, Gil-Loaiza J, Carpenter E, Singer E, Hildebrand G, Shi L, Hoyt DW, Chu RK, Toyoda J, Krechmer JE, Claflin MS, Ayala-Ortiz C, Freire-Zapata V, Pfannerstill EY, Daber LE, Meeran K, Dippold MA, Kreuzwieser J, Williams J, Ladd SN, Werner C, Tfaily MM, Meredith LK. Honeker LK, et al. Among authors: freire zapata v. Nat Microbiol. 2024 Apr;9(4):1146-1147. doi: 10.1038/s41564-023-01507-7. Nat Microbiol. 2024. PMID: 37803148 Free PMC article. No abstract available.
Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest.
Honeker LK, Pugliese G, Ingrisch J, Fudyma J, Gil-Loaiza J, Carpenter E, Singer E, Hildebrand G, Shi L, Hoyt DW, Chu RK, Toyoda J, Krechmer JE, Claflin MS, Ayala-Ortiz C, Freire-Zapata V, Pfannerstill EY, Daber LE, Meeran K, Dippold MA, Kreuzwieser J, Williams J, Ladd SN, Werner C, Tfaily MM, Meredith LK. Honeker LK, et al. Among authors: freire zapata v. Nat Microbiol. 2023 Aug;8(8):1480-1494. doi: 10.1038/s41564-023-01432-9. Epub 2023 Jul 31. Nat Microbiol. 2023. PMID: 37524975 Free PMC article.
Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants.
Hildebrand GA, Honeker LK, Freire-Zapata V, Ayala-Ortiz C, Rajakaruna S, Fudyma J, Daber LE, AminiTabrizi R, Chu RL, Toyoda J, Flowers SE, Hoyt DW, Hamdan R, Gil-Loaiza J, Shi L, Dippold MA, Ladd SN, Werner C, Meredith LK, Tfaily MM. Hildebrand GA, et al. Among authors: freire zapata v. Sci Total Environ. 2023 Nov 15;899:165689. doi: 10.1016/j.scitotenv.2023.165689. Epub 2023 Jul 20. Sci Total Environ. 2023. PMID: 37481084