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Microbiome-metabolite linkages drive greenhouse gas dynamics over a permafrost thaw gradient.
Freire-Zapata V, Holland-Moritz H, Cronin DR, Aroney S, Smith DA, Wilson RM, Ernakovich JG, Woodcroft BJ, Bagby SC; EMERGE 2012 Field Team; EMERGE Biology Integration Coordinators; Rich VI, Sullivan MB, Stegen JC, Tfaily MM. Freire-Zapata V, et al. Among authors: sullivan mb. Nat Microbiol. 2024 Nov;9(11):2892-2908. doi: 10.1038/s41564-024-01800-z. Epub 2024 Oct 1. Nat Microbiol. 2024. PMID: 39354152 Free PMC article.
Illuminating structural proteins in viral "dark matter" with metaproteomics.
Brum JR, Ignacio-Espinoza JC, Kim EH, Trubl G, Jones RM, Roux S, VerBerkmoes NC, Rich VI, Sullivan MB. Brum JR, et al. Among authors: sullivan mb. Proc Natl Acad Sci U S A. 2016 Mar 1;113(9):2436-41. doi: 10.1073/pnas.1525139113. Epub 2016 Feb 16. Proc Natl Acad Sci U S A. 2016. PMID: 26884177 Free PMC article.
Host-linked soil viral ecology along a permafrost thaw gradient.
Emerson JB, Roux S, Brum JR, Bolduc B, Woodcroft BJ, Jang HB, Singleton CM, Solden LM, Naas AE, Boyd JA, Hodgkins SB, Wilson RM, Trubl G, Li C, Frolking S, Pope PB, Wrighton KC, Crill PM, Chanton JP, Saleska SR, Tyson GW, Rich VI, Sullivan MB. Emerson JB, et al. Among authors: sullivan mb. Nat Microbiol. 2018 Aug;3(8):870-880. doi: 10.1038/s41564-018-0190-y. Epub 2018 Jul 16. Nat Microbiol. 2018. PMID: 30013236 Free PMC article.
Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing.
Trubl G, Jang HB, Roux S, Emerson JB, Solonenko N, Vik DR, Solden L, Ellenbogen J, Runyon AT, Bolduc B, Woodcroft BJ, Saleska SR, Tyson GW, Wrighton KC, Sullivan MB, Rich VI. Trubl G, et al. Among authors: sullivan mb. mSystems. 2018 Oct 2;3(5):e00076-18. doi: 10.1128/mSystems.00076-18. eCollection 2018 Sep-Oct. mSystems. 2018. PMID: 30320215 Free PMC article.
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem.
Solden LM, Naas AE, Roux S, Daly RA, Collins WB, Nicora CD, Purvine SO, Hoyt DW, Schückel J, Jørgensen B, Willats W, Spalinger DE, Firkins JL, Lipton MS, Sullivan MB, Pope PB, Wrighton KC. Solden LM, et al. Among authors: sullivan mb. Nat Microbiol. 2018 Nov;3(11):1274-1284. doi: 10.1038/s41564-018-0225-4. Epub 2018 Oct 24. Nat Microbiol. 2018. PMID: 30356154 Free PMC article.
Optimizing de novo genome assembly from PCR-amplified metagenomes.
Roux S, Trubl G, Goudeau D, Nath N, Couradeau E, Ahlgren NA, Zhan Y, Marsan D, Chen F, Fuhrman JA, Northen TR, Sullivan MB, Rich VI, Malmstrom RR, Eloe-Fadrosh EA. Roux S, et al. Among authors: sullivan mb. PeerJ. 2019 May 9;7:e6902. doi: 10.7717/peerj.6902. eCollection 2019. PeerJ. 2019. PMID: 31119088 Free PMC article.
285 results