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ChromaFold predicts the 3D contact map from single-cell chromatin accessibility.
Gao VR, Yang R, Das A, Luo R, Luo H, McNally DR, Karagiannidis I, Rivas MA, Wang ZM, Barisic D, Karbalayghareh A, Wong W, Zhan YA, Chin CR, Noble WS, Bilmes JA, Apostolou E, Kharas MG, Béguelin W, Viny AD, Huangfu D, Rudensky AY, Melnick AM, Leslie CS. Gao VR, et al. Among authors: das a. Nat Commun. 2024 Nov 1;15(1):9432. doi: 10.1038/s41467-024-53628-0. Nat Commun. 2024. PMID: 39487131 Free PMC article.
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility.
Gao VR, Yang R, Das A, Luo R, Luo H, McNally DR, Karagiannidis I, Rivas MA, Wang ZM, Barisic D, Karbalayghareh A, Wong W, Zhan YA, Chin CR, Noble W, Bilmes JA, Apostolou E, Kharas MG, Béguelin W, Viny AD, Huangfu D, Rudensky AY, Melnick AM, Leslie CS. Gao VR, et al. Among authors: das a. bioRxiv [Preprint]. 2023 Jul 28:2023.07.27.550836. doi: 10.1101/2023.07.27.550836. bioRxiv. 2023. Update in: Nat Commun. 2024 Nov 1;15(1):9432. doi: 10.1038/s41467-024-53628-0 PMID: 37546906 Free PMC article. Updated. Preprint.
Epiphany: predicting Hi-C contact maps from 1D epigenomic signals.
Yang R, Das A, Gao VR, Karbalayghareh A, Noble WS, Bilmes JA, Leslie CS. Yang R, et al. Among authors: das a. Genome Biol. 2023 Jun 6;24(1):134. doi: 10.1186/s13059-023-02934-9. Genome Biol. 2023. PMID: 37280678 Free PMC article.
Mode of delivery and outcomes among inborn extremely preterm singletons: A cohort study.
Travers CP, Chowdhury D, Das A, Ambalavanan N, Peralta-Carcelen M, Newman N, Cosby S, Wyckoff M, Tita A, Carlo WA; Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network. Travers CP, et al. Among authors: das a. Acta Obstet Gynecol Scand. 2024 Dec 1. doi: 10.1111/aogs.15028. Online ahead of print. Acta Obstet Gynecol Scand. 2024. PMID: 39618158
9,729 results