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Temporal signal and the phylodynamic threshold of SARS-CoV-2.
Duchene S, Featherstone L, Haritopoulou-Sinanidou M, Rambaut A, Lemey P, Baele G. Duchene S, et al. Virus Evol. 2020 Aug 19;6(2):veaa061. doi: 10.1093/ve/veaa061. eCollection 2020 Jul. Virus Evol. 2020. PMID: 33235813 Free PMC article.
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis.
Bouckaert R, Vaughan TG, Barido-Sottani J, Duchêne S, Fourment M, Gavryushkina A, Heled J, Jones G, Kühnert D, De Maio N, Matschiner M, Mendes FK, Müller NF, Ogilvie HA, du Plessis L, Popinga A, Rambaut A, Rasmussen D, Siveroni I, Suchard MA, Wu CH, Xie D, Zhang C, Stadler T, Drummond AJ. Bouckaert R, et al. Among authors: duchene s. PLoS Comput Biol. 2019 Apr 8;15(4):e1006650. doi: 10.1371/journal.pcbi.1006650. eCollection 2019 Apr. PLoS Comput Biol. 2019. PMID: 30958812 Free PMC article.
ClockstaRX: Testing Molecular Clock Hypotheses With Genomic Data.
Duchêne DA, Duchêne S, Stiller J, Heller R, Ho SYW. Duchêne DA, et al. Among authors: duchene s. Genome Biol Evol. 2024 Apr 2;16(4):evae064. doi: 10.1093/gbe/evae064. Genome Biol Evol. 2024. PMID: 38526019 Free PMC article.
The molecular clock of Mycobacterium tuberculosis.
Menardo F, Duchêne S, Brites D, Gagneux S. Menardo F, et al. Among authors: duchene s. PLoS Pathog. 2019 Sep 12;15(9):e1008067. doi: 10.1371/journal.ppat.1008067. eCollection 2019 Sep. PLoS Pathog. 2019. PMID: 31513651 Free PMC article.
135 results