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MEA-NAP: A flexible network analysis pipeline for neuronal 2D and 3D organoid multielectrode recordings.
Sit TPH, Feord RC, Dunn AWE, Chabros J, Oluigbo D, Smith HH, Burn L, Chang E, Boschi A, Yuan Y, Gibbons GM, Khayat-Khoei M, De Angelis F, Hemberg E, Hemberg M, Lancaster MA, Lakatos A, Eglen SJ, Paulsen O, Mierau SB. Sit TPH, et al. Among authors: yuan y. Cell Rep Methods. 2024 Nov 18;4(11):100901. doi: 10.1016/j.crmeth.2024.100901. Epub 2024 Nov 8. Cell Rep Methods. 2024. PMID: 39520988 Free article.
MEA-NAP compares microscale functional connectivity, topology, and network dynamics in organoid or monolayer neuronal cultures.
Sit TP, Feord RC, Dunn AW, Chabros J, Oluigbo D, Smith HH, Burn L, Chang E, Boschi A, Yuan Y, Gibbons GM, Khayat-Khoei M, De Angelis F, Hemberg E, Hemberg M, Lancaster MA, Lakatos A, Eglen SJ, Paulsen O, Mierau SB. Sit TP, et al. Among authors: yuan y. bioRxiv [Preprint]. 2024 Apr 11:2024.02.05.578738. doi: 10.1101/2024.02.05.578738. bioRxiv. 2024. PMID: 38370637 Free PMC article. Preprint.
A symbiotic mosquito-gut bacterium for flavivirus control.
Wang J, Zhu Y, Leng J, Yuan Y, Cao Y, Cheng G, Xia X. Wang J, et al. Among authors: yuan y. Clin Transl Med. 2024 Dec;14(12):e70087. doi: 10.1002/ctm2.70087. Clin Transl Med. 2024. PMID: 39611431 Review.
Insights into chemoautotrophic traits of a prevalent bacterial phylum CSP1-3, herein Sysuimicrobiota.
Liu L, Lian ZH, Lv AP, Salam N, Zhang JC, Li MM, Sun WM, Tan S, Luo ZH, Gao L, Yuan Y, Ming YZ, OuYang YT, Li YX, Liu ZT, Hu CJ, Chen Y, Hua ZS, Shu WS, Hedlund BP, Li WJ, Jiao JY. Liu L, et al. Among authors: yuan y. Natl Sci Rev. 2024 Oct 23;11(11):nwae378. doi: 10.1093/nsr/nwae378. eCollection 2024 Nov. Natl Sci Rev. 2024. PMID: 39611041 Free PMC article.
Disease Severity Staging System for NOTCH3-Associated Small Vessel Disease, Including CADASIL.
Gravesteijn G, Rutten JW, Cerfontaine MN, Hack RJ, Liao YC, Jolly AA, Guey S, Hsu SL, Park JY, Yuan Y, Kopczak A, Rifino N, Neilson SJ, Poggesi A, Shourav MMI, Saito S, Ishiyama H, Domínguez Mayoral A, Nogueira R, Muiño E, Andersen P, De Stefano N, Santo G, Sukhonpanich N, Mele F, Park A, Lee JS, Rodríguez-Girondo M, Vonk SJJ, Brodtmann A, Börjesson-Hanson A, Pantoni L, Fernández-Cadenas I, Silva AR, Montanaro VVA, Kalaria RN, Lopergolo D, Ihara M, Meschia JF, Muir KW, Bersano A, Pescini F, Duering M, Choi JC, Ling C, Kim H, Markus HS, Chabriat H, Lee YC, Lesnik Oberstein SAJ. Gravesteijn G, et al. Among authors: yuan y. JAMA Neurol. 2024 Nov 29. doi: 10.1001/jamaneurol.2024.4487. Online ahead of print. JAMA Neurol. 2024. PMID: 39610302
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