Miao Y - Search Results

1

Architecture and activation of single-pass transmembrane receptor guanylyl cyclase.

Liu S, Payne AM, Wang J, Zhu L, Paknejad N, Eng ET, Liu W, Miao Y, Hite RK, Huang XY. Liu S, et al. Among authors: miao y. Nat Struct Mol Biol. 2024 Nov 14. doi: 10.1038/s41594-024-01426-z. Online ahead of print. Nat Struct Mol Biol. 2024. PMID: 39543315

2

Structures of β₁-adrenergic receptor in complex with Gs and ligands of different efficacies.

Su M, Paknejad N, Zhu L, Wang J, Do HN, Miao Y, Liu W, Hite RK, Huang XY. Su M, et al. Among authors: miao y. Nat Commun. 2022 Jul 14;13(1):4095. doi: 10.1038/s41467-022-31823-1. Nat Commun. 2022. PMID: 35835792 Free PMC article.

3

Recent advances in computational studies of GPCR-G protein interactions.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. Adv Protein Chem Struct Biol. 2019;116:397-419. doi: 10.1016/bs.apcsb.2018.11.011. Epub 2019 Jan 3. Adv Protein Chem Struct Biol. 2019. PMID: 31036298 Free PMC article. Review.

4

Structural basis of agonist specificity of α_1A-adrenergic receptor.

Su M, Wang J, Xiang G, Do HN, Levitz J, Miao Y, Huang XY. Su M, et al. Among authors: miao y. Nat Commun. 2023 Aug 10;14(1):4819. doi: 10.1038/s41467-023-40524-2. Nat Commun. 2023. PMID: 37563160 Free PMC article.

5

Mechanistic Insights into Specific G Protein Interactions with Adenosine Receptors.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. J Phys Chem B. 2019 Aug 1;123(30):6462-6473. doi: 10.1021/acs.jpcb.9b04867. Epub 2019 Jul 22. J Phys Chem B. 2019. PMID: 31283874 Free PMC article.

6

Peptide Gaussian accelerated molecular dynamics (Pep-GaMD): Enhanced sampling and free energy and kinetics calculations of peptide binding.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. J Chem Phys. 2020 Oct 21;153(15):154109. doi: 10.1063/5.0021399. J Chem Phys. 2020. PMID: 33092378 Free PMC article.

7

Ligand Gaussian Accelerated Molecular Dynamics 3 (LiGaMD3): Improved Calculations of Binding Thermodynamics and Kinetics of Both Small Molecules and Flexible Peptides.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. J Chem Theory Comput. 2024 Jul 23;20(14):5829-5841. doi: 10.1021/acs.jctc.4c00502. Epub 2024 Jul 13. J Chem Theory Comput. 2024. PMID: 39002136

8

G-Protein-Coupled Receptor-Membrane Interactions Depend on the Receptor Activation State.

Bhattarai A, Wang J, Miao Y. Bhattarai A, et al. Among authors: miao y. J Comput Chem. 2020 Feb 15;41(5):460-471. doi: 10.1002/jcc.26082. Epub 2019 Oct 10. J Comput Chem. 2020. PMID: 31602675 Free PMC article.

9

Protein-Protein Interaction-Gaussian Accelerated Molecular Dynamics (PPI-GaMD): Characterization of Protein Binding Thermodynamics and Kinetics.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. J Chem Theory Comput. 2022 Mar 8;18(3):1275-1285. doi: 10.1021/acs.jctc.1c00974. Epub 2022 Jan 31. J Chem Theory Comput. 2022. PMID: 35099970 Free PMC article.

10

Ligand Gaussian Accelerated Molecular Dynamics 2 (LiGaMD2): Improved Calculations of Ligand Binding Thermodynamics and Kinetics with Closed Protein Pocket.

Wang J, Miao Y. Wang J, et al. Among authors: miao y. J Chem Theory Comput. 2023 Feb 14;19(3):733-745. doi: 10.1021/acs.jctc.2c01194. Epub 2023 Jan 27. J Chem Theory Comput. 2023. PMID: 36706316 Free PMC article.

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