Underwood BA - Search Results

1

GenBank 2025 update.

Sayers EW, Cavanaugh M, Frisse L, Pruitt KD, Schneider VA, Underwood BA, Yankie L, Karsch-Mizrachi I. Sayers EW, et al. Among authors: underwood ba. Nucleic Acids Res. 2024 Nov 18:gkae1114. doi: 10.1093/nar/gkae1114. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39558184

2

Rapid automated validation, annotation and publication of SARS-CoV-2 sequences to GenBank.

Underwood BA, Yankie L, Nawrocki EP, Palanigobu V, Gotvyanskyy S, Calhoun VC, Kornbluh M, Smith TG, Fleischmann L, Sinyakov D, Bollin CJ, Karsch-Mizrachi I. Underwood BA, et al. Database (Oxford). 2022 Mar 1;2022:baac006. doi: 10.1093/database/baac006. Database (Oxford). 2022. PMID: 35230423 Free PMC article.

3

Ribovore: ribosomal RNA sequence analysis for GenBank submissions and database curation.

Schäffer AA, McVeigh R, Robbertse B, Schoch CL, Johnston A, Underwood BA, Karsch-Mizrachi I, Nawrocki EP. Schäffer AA, et al. Among authors: underwood ba. BMC Bioinformatics. 2021 Aug 12;22(1):400. doi: 10.1186/s12859-021-04316-z. BMC Bioinformatics. 2021. PMID: 34384346 Free PMC article.

4

High throughput generation of promoter reporter (GFP) transgenic lines of low expressing genes in Arabidopsis and analysis of their expression patterns.

Xiao YL, Redman JC, Monaghan EL, Zhuang J, Underwood BA, Moskal WA, Wang W, Wu HC, Town CD. Xiao YL, et al. Among authors: underwood ba. Plant Methods. 2010 Aug 6;6:18. doi: 10.1186/1746-4811-6-18. Plant Methods. 2010. PMID: 20687964 Free PMC article.

5

Petunia floral volatile benzenoid/phenylpropanoid genes are regulated in a similar manner.

Colquhoun TA, Verdonk JC, Schimmel BC, Tieman DM, Underwood BA, Clark DG. Colquhoun TA, et al. Among authors: underwood ba. Phytochemistry. 2010 Feb;71(2-3):158-67. doi: 10.1016/j.phytochem.2009.09.036. Epub 2009 Nov 2. Phytochemistry. 2010. PMID: 19889429

6

Flower-specific expression of the Agrobacterium tumefaciens isopentenyltransferase gene results in radial expansion of floral organs in Petunia hybrida.

Verdonk JC, Shibuya K, Loucas HM, Colquhoun TA, Underwood BA, Clark DG. Verdonk JC, et al. Among authors: underwood ba. Plant Biotechnol J. 2008 Sep;6(7):694-701. doi: 10.1111/j.1467-7652.2008.00349.x. Epub 2008 May 8. Plant Biotechnol J. 2008. PMID: 18482222 Free article.

7

Tissue-specific PhBPBT expression is differentially regulated in response to endogenous ethylene.

Dexter RJ, Verdonk JC, Underwood BA, Shibuya K, Schmelz EA, Clark DG. Dexter RJ, et al. Among authors: underwood ba. J Exp Bot. 2008;59(3):609-18. doi: 10.1093/jxb/erm337. Epub 2008 Feb 5. J Exp Bot. 2008. PMID: 18256048

8

Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants.

Silverstein KA, Moskal WA Jr, Wu HC, Underwood BA, Graham MA, Town CD, VandenBosch KA. Silverstein KA, et al. Among authors: underwood ba. Plant J. 2007 Jul;51(2):262-80. doi: 10.1111/j.1365-313X.2007.03136.x. Epub 2007 Jun 12. Plant J. 2007. PMID: 17565583 Free article.

9

Experimental validation of novel genes predicted in the un-annotated regions of the Arabidopsis genome.

Moskal WA Jr, Wu HC, Underwood BA, Wang W, Town CD, Xiao Y. Moskal WA Jr, et al. Among authors: underwood ba. BMC Genomics. 2007 Jan 17;8:18. doi: 10.1186/1471-2164-8-18. BMC Genomics. 2007. PMID: 17229318 Free PMC article.

10

Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.

Underwood BA, Vanderhaeghen R, Whitford R, Town CD, Hilson P. Underwood BA, et al. Plant Biotechnol J. 2006 May;4(3):317-24. doi: 10.1111/j.1467-7652.2006.00183.x. Plant Biotechnol J. 2006. PMID: 17147637 Free article.

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