Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

938 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Publication Date timeline is not available.
Page 1
The Pfam protein families database: embracing AI/ML.
Paysan-Lafosse T, Andreeva A, Blum M, Chuguransky SR, Grego T, Pinto BL, Salazar GA, Bileschi ML, Llinares-López F, Meng-Papaxanthos L, Colwell LJ, Grishin NV, Schaeffer RD, Clementel D, Tosatto SCE, Sonhammer E, Wood V, Bateman A. Paysan-Lafosse T, et al. Among authors: bateman a. Nucleic Acids Res. 2024 Nov 14:gkae997. doi: 10.1093/nar/gkae997. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39540428
InterPro: the protein sequence classification resource in 2025.
Blum M, Andreeva A, Florentino LC, Chuguransky SR, Grego T, Hobbs E, Pinto BL, Orr A, Paysan-Lafosse T, Ponamareva I, Salazar GA, Bordin N, Bork P, Bridge A, Colwell L, Gough J, Haft DH, Letunic I, Llinares-López F, Marchler-Bauer A, Meng-Papaxanthos L, Mi H, Natale DA, Orengo CA, Pandurangan AP, Piovesan D, Rivoire C, Sigrist CJA, Thanki N, Thibaud-Nissen F, Thomas PD, Tosatto SCE, Wu CH, Bateman A. Blum M, et al. Among authors: bateman a. Nucleic Acids Res. 2024 Nov 20:gkae1082. doi: 10.1093/nar/gkae1082. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39565202
Pfam: The protein families database in 2021.
Mistry J, Chuguransky S, Williams L, Qureshi M, Salazar GA, Sonnhammer ELL, Tosatto SCE, Paladin L, Raj S, Richardson LJ, Finn RD, Bateman A. Mistry J, et al. Among authors: bateman a. Nucleic Acids Res. 2021 Jan 8;49(D1):D412-D419. doi: 10.1093/nar/gkaa913. Nucleic Acids Res. 2021. PMID: 33125078 Free PMC article.
InterPro in 2022.
Paysan-Lafosse T, Blum M, Chuguransky S, Grego T, Pinto BL, Salazar GA, Bileschi ML, Bork P, Bridge A, Colwell L, Gough J, Haft DH, Letunić I, Marchler-Bauer A, Mi H, Natale DA, Orengo CA, Pandurangan AP, Rivoire C, Sigrist CJA, Sillitoe I, Thanki N, Thomas PD, Tosatto SCE, Wu CH, Bateman A. Paysan-Lafosse T, et al. Among authors: bateman a. Nucleic Acids Res. 2023 Jan 6;51(D1):D418-D427. doi: 10.1093/nar/gkac993. Nucleic Acids Res. 2023. PMID: 36350672 Free PMC article.
The InterPro protein families and domains database: 20 years on.
Blum M, Chang HY, Chuguransky S, Grego T, Kandasaamy S, Mitchell A, Nuka G, Paysan-Lafosse T, Qureshi M, Raj S, Richardson L, Salazar GA, Williams L, Bork P, Bridge A, Gough J, Haft DH, Letunic I, Marchler-Bauer A, Mi H, Natale DA, Necci M, Orengo CA, Pandurangan AP, Rivoire C, Sigrist CJA, Sillitoe I, Thanki N, Thomas PD, Tosatto SCE, Wu CH, Bateman A, Finn RD. Blum M, et al. Among authors: bateman a. Nucleic Acids Res. 2021 Jan 8;49(D1):D344-D354. doi: 10.1093/nar/gkaa977. Nucleic Acids Res. 2021. PMID: 33156333 Free PMC article.
Investigation of protein family relationships with deep learning.
Ponamareva I, Andreeva A, Bileschi ML, Colwell L, Bateman A. Ponamareva I, et al. Among authors: bateman a. Bioinform Adv. 2024 Sep 18;4(1):vbae132. doi: 10.1093/bioadv/vbae132. eCollection 2024. Bioinform Adv. 2024. PMID: 39399373 Free PMC article.
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
Apweiler R, Attwood TK, Bairoch A, Bateman A, Birney E, Biswas M, Bucher P, Cerutti L, Corpet F, Croning MD, Durbin R, Falquet L, Fleischmann W, Gouzy J, Hermjakob H, Hulo N, Jonassen I, Kahn D, Kanapin A, Karavidopoulou Y, Lopez R, Marx B, Mulder NJ, Oinn TM, Pagni M, Servant F, Sigrist CJ, Zdobnov EM. Apweiler R, et al. Among authors: bateman a. Nucleic Acids Res. 2001 Jan 1;29(1):37-40. doi: 10.1093/nar/29.1.37. Nucleic Acids Res. 2001. PMID: 11125043 Free PMC article.
Uncovering new families and folds in the natural protein universe.
Durairaj J, Waterhouse AM, Mets T, Brodiazhenko T, Abdullah M, Studer G, Tauriello G, Akdel M, Andreeva A, Bateman A, Tenson T, Hauryliuk V, Schwede T, Pereira J. Durairaj J, et al. Among authors: bateman a. Nature. 2023 Oct;622(7983):646-653. doi: 10.1038/s41586-023-06622-3. Epub 2023 Sep 13. Nature. 2023. PMID: 37704037 Free PMC article.
When will RNA get its AlphaFold moment?
Schneider B, Sweeney BA, Bateman A, Cerny J, Zok T, Szachniuk M. Schneider B, et al. Among authors: bateman a. Nucleic Acids Res. 2023 Oct 13;51(18):9522-9532. doi: 10.1093/nar/gkad726. Nucleic Acids Res. 2023. PMID: 37702120 Free PMC article.
938 results