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Page 1
Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates.
Washburn JD, Varela JI, Xavier A, Chen Q, Ertl D, Gage JL, Holland JB, Lima DC, Romay MC, Lopez-Cruz M, de Los Campos G, Barber W, Zimmer C, Trucillo Silva I, Rocha F, Rincent R, Ali B, Hu H, Runcie DE, Gusev K, Slabodkin A, Bax P, Aubert J, Gangloff H, Mary-Huard T, Vanrenterghem T, Quesada-Traver C, Yates S, Ariza-Suárez D, Ulrich A, Wyler M, Kick DR, Bellis ES, Causey JL, Soriano Chavez E, Wang Y, Piyush V, Fernando GD, Hu RK, Kumar R, Timon AJ, Venkatesh R, Segura Abá K, Chen H, Ranaweera T, Shiu SH, Wang P, Gordon MJ, Amos BK, Busato S, Perondi D, Gogna A, Psaroudakis D, Chen CPJ, Al-Mamun HA, Danilevicz MF, Upadhyaya SR, Edwards D, de Leon N. Washburn JD, et al. Among authors: upadhyaya sr. Genetics. 2024 Nov 22:iyae195. doi: 10.1093/genetics/iyae195. Online ahead of print. Genetics. 2024. PMID: 39576009
Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates.
Washburn JD, Varela JI, Xavier A, Chen Q, Ertl D, Gage JL, Holland JB, Lima DC, Romay MC, Lopez-Cruz M, de Los Campos G, Barber W, Zimmer C, Silva IT, Rocha F, Rincent R, Ali B, Hu H, Runcie DE, Gusev K, Slabodkin A, Bax P, Aubert J, Gangloff H, Mary-Huard T, Vanrenterghem T, Quesada-Traver C, Yates S, Ariza-Suárez D, Ulrich A, Wyler M, Kick DR, Bellis ES, Causey JL, Chavez ES, Wang Y, Piyush V, Fernando GD, Hu RK, Kumar R, Timon AJ, Venkatesh R, Abá KS, Chen H, Ranaweera T, Shiu SH, Wang P, Gordon MJ, Amos BK, Busato S, Perondi D, Gogna A, Psaroudakis D, Chen CPJ, Al-Mamun HA, Danilevicz MF, Upadhyaya SR, Edwards D, de Leon N. Washburn JD, et al. Among authors: upadhyaya sr. bioRxiv [Preprint]. 2024 Sep 19:2024.09.13.612969. doi: 10.1101/2024.09.13.612969. bioRxiv. 2024. Update in: Genetics. 2024 Nov 22:iyae195. doi: 10.1093/genetics/iyae195 PMID: 39345633 Free PMC article. Updated. Preprint.
DNABERT-based explainable lncRNA identification in plant genome assemblies.
Danilevicz MF, Gill M, Fernandez CGT, Petereit J, Upadhyaya SR, Batley J, Bennamoun M, Edwards D, Bayer PE. Danilevicz MF, et al. Among authors: upadhyaya sr. Comput Struct Biotechnol J. 2023 Nov 17;21:5676-5685. doi: 10.1016/j.csbj.2023.11.025. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 38058296 Free PMC article.
Evaluating Plant Gene Models Using Machine Learning.
Upadhyaya SR, Bayer PE, Tay Fernandez CG, Petereit J, Batley J, Bennamoun M, Boussaid F, Edwards D. Upadhyaya SR, et al. Plants (Basel). 2022 Jun 20;11(12):1619. doi: 10.3390/plants11121619. Plants (Basel). 2022. PMID: 35736770 Free PMC article.
Endoscopic CSF rhinorrhea closure: our experience in 267 cases.
Kirtane MV, Gautham K, Upadhyaya SR. Kirtane MV, et al. Among authors: upadhyaya sr. Otolaryngol Head Neck Surg. 2005 Feb;132(2):208-12. doi: 10.1016/j.otohns.2004.09.004. Otolaryngol Head Neck Surg. 2005. PMID: 15692527