Ferrer-Bonsoms JA - Search Results

1

A Systematic Identification of RNA-Binding Proteins (RBPs) Driving Aberrant Splicing in Cancer.

Lobato-Fernandez C, Gimeno M, San Martín A, Anorbe A, Rubio A, Ferrer-Bonsoms JA. Lobato-Fernandez C, et al. Among authors: ferrer bonsoms ja. Biomedicines. 2024 Nov 13;12(11):2592. doi: 10.3390/biomedicines12112592. Biomedicines. 2024. PMID: 39595158 Free PMC article.

2

Comparison of 5-Year Survival and Disease Recurrence After Trisegmentectomy or Left Upper Lobectomy: A Propensity Score Analysis of the National GEVATS Database.

Aguinagalde B, Ferrer-Bonsoms JA, López I, Lizarbe IA, Fernández-Monge A, Recuero JL, Royo I, Embún R; GEVATS. Aguinagalde B, et al. Among authors: ferrer bonsoms ja. Arch Bronconeumol. 2024 Nov;60(11):705-713. doi: 10.1016/j.arbres.2024.05.032. Epub 2024 Jun 4. Arch Bronconeumol. 2024. PMID: 38971669 English, Spanish.

3

EventPointer 3.0: flexible and accurate splicing analysis that includes studying the differential usage of protein-domains.

Ferrer-Bonsoms JA, Gimeno M, Olaverri D, Sacristan P, Lobato C, Castilla C, Carazo F, Rubio A. Ferrer-Bonsoms JA, et al. NAR Genom Bioinform. 2022 Sep 15;4(3):lqac067. doi: 10.1093/nargab/lqac067. eCollection 2022 Sep. NAR Genom Bioinform. 2022. PMID: 36128425 Free PMC article.

4

On the identifiability of the isoform deconvolution problem: application to select the proper fragment length in an RNA-seq library.

Ferrer-Bonsoms JA, Morales X, Afshar PT, Wong WH, Rubio A. Ferrer-Bonsoms JA, et al. Bioinformatics. 2022 Mar 4;38(6):1491-1496. doi: 10.1093/bioinformatics/btab873. Bioinformatics. 2022. PMID: 34978563 Free PMC article.

5

Rediscover: an R package to identify mutually exclusive mutations.

Ferrer-Bonsoms JA, Jareno L, Rubio A. Ferrer-Bonsoms JA, et al. Bioinformatics. 2022 Jan 12;38(3):844-845. doi: 10.1093/bioinformatics/btab709. Bioinformatics. 2022. PMID: 34664620

6

ISOGO: Functional annotation of protein-coding splice variants.

Ferrer-Bonsoms JA, Cassol I, Fernández-Acín P, Castilla C, Carazo F, Rubio A. Ferrer-Bonsoms JA, et al. Sci Rep. 2020 Jan 23;10(1):1069. doi: 10.1038/s41598-020-57974-z. Sci Rep. 2020. PMID: 31974522 Free PMC article.

7

Integration of CLIP experiments of RNA-binding proteins: a novel approach to predict context-dependent splicing factors from transcriptomic data.

Carazo F, Gimeno M, Ferrer-Bonsoms JA, Rubio A. Carazo F, et al. Among authors: ferrer bonsoms ja. BMC Genomics. 2019 Jun 25;20(1):521. doi: 10.1186/s12864-019-5900-1. BMC Genomics. 2019. PMID: 31238884 Free PMC article.

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