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Page 1
Real-time analysis of liquid jet sample delivery stability for an X-ray free-electron laser using machine vision.
Patel J, Round A, de Wijn R, Vakili M, Giovanetti G, Melo DFMVE, E J, Sikorski M, Koliyadu J, Koua FHM, Sato T, Mancuso A, Peele A, Abbey B. Patel J, et al. Among authors: vakili m. J Appl Crystallogr. 2024 Nov 17;57(Pt 6):1859-1870. doi: 10.1107/S1600576724009853. eCollection 2024 Dec 1. J Appl Crystallogr. 2024. PMID: 39628876 Free PMC article.
Co-flow injection for serial crystallography at X-ray free-electron lasers.
Doppler D, Rabbani MT, Letrun R, Cruz Villarreal J, Kim DH, Gandhi S, Egatz-Gomez A, Sonker M, Chen J, Koua FHM, Yang J, Youssef M, Mazalova V, Bajt S, Shelby ML, Coleman MA, Wiedorn MO, Knoska J, Schön S, Sato T, Hunter MS, Hosseinizadeh A, Kuptiz C, Nazari R, Alvarez RC, Karpos K, Zaare S, Dobson Z, Discianno E, Zhang S, Zook JD, Bielecki J, de Wijn R, Round AR, Vagovic P, Kloos M, Vakili M, Ketawala GK, Stander NE, Olson TL, Morin K, Mondal J, Nguyen J, Meza-Aguilar JD, Kodis G, Vaiana S, Martin-Garcia JM, Mariani V, Schwander P, Schmidt M, Messerschmidt M, Ourmazd A, Zatsepin N, Weierstall U, Bruce BD, Mancuso AP, Grant T, Barty A, Chapman HN, Frank M, Fromme R, Spence JCH, Botha S, Fromme P, Kirian RA, Ros A. Doppler D, et al. Among authors: vakili m. J Appl Crystallogr. 2022 Feb 1;55(Pt 1):1-13. doi: 10.1107/S1600576721011079. eCollection 2022 Feb 1. J Appl Crystallogr. 2022. PMID: 35153640 Free PMC article.
Towards real-time analysis of liquid jet alignment in serial femtosecond crystallography.
Patel J, Round A, Bielecki J, Doerner K, Kirkwood H, Letrun R, Schulz J, Sikorski M, Vakili M, de Wijn R, Peele A, Mancuso AP, Ab Bey B. Patel J, et al. Among authors: vakili m. J Appl Crystallogr. 2022 Aug 1;55(Pt 4):944-952. doi: 10.1107/S1600576722005891. eCollection 2022 Aug 1. J Appl Crystallogr. 2022. PMID: 35974719 Free PMC article.
Data reduction for serial crystallography using a robust peak finder.
Hadian-Jazi M, Sadri A, Barty A, Yefanov O, Galchenkova M, Oberthuer D, Komadina D, Brehm W, Kirkwood H, Mills G, de Wijn R, Letrun R, Kloos M, Vakili M, Gelisio L, Darmanin C, Mancuso AP, Chapman HN, Abbey B. Hadian-Jazi M, et al. Among authors: vakili m. J Appl Crystallogr. 2021 Sep 13;54(Pt 5):1360-1378. doi: 10.1107/S1600576721007317. eCollection 2021 Oct 1. J Appl Crystallogr. 2021. PMID: 34667447 Free PMC article.
Automatic bad-pixel mask maker for X-ray pixel detectors with application to serial crystallography.
Sadri A, Hadian-Jazi M, Yefanov O, Galchenkova M, Kirkwood H, Mills G, Sikorski M, Letrun R, de Wijn R, Vakili M, Oberthuer D, Komadina D, Brehm W, Mancuso AP, Carnis J, Gelisio L, Chapman HN. Sadri A, et al. Among authors: vakili m. J Appl Crystallogr. 2022 Nov 21;55(Pt 6):1549-1561. doi: 10.1107/S1600576722009815. eCollection 2022 Dec 1. J Appl Crystallogr. 2022. PMID: 36570663 Free PMC article.
Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography.
Vakili M, Han H, Schmidt C, Wrona A, Kloos M, de Diego I, Dörner K, Geng T, Kim C, Koua FHM, Melo DVM, Rappas M, Round A, Round E, Sikorski M, Valerio J, Zhou T, Lorenzen K, Schulz J. Vakili M, et al. J Appl Crystallogr. 2023 Jun 12;56(Pt 4):1038-1045. doi: 10.1107/S1600576723004405. eCollection 2023 Aug 1. J Appl Crystallogr. 2023. PMID: 37555221 Free PMC article.
3D printed devices and infrastructure for liquid sample delivery at the European XFEL.
Vakili M, Bielecki J, Knoška J, Otte F, Han H, Kloos M, Schubert R, Delmas E, Mills G, de Wijn R, Letrun R, Dold S, Bean R, Round A, Kim Y, Lima FA, Dörner K, Valerio J, Heymann M, Mancuso AP, Schulz J. Vakili M, et al. J Synchrotron Radiat. 2022 Mar 1;29(Pt 2):331-346. doi: 10.1107/S1600577521013370. Epub 2022 Feb 15. J Synchrotron Radiat. 2022. PMID: 35254295 Free PMC article.
A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL.
Kirkwood HJ, de Wijn R, Mills G, Letrun R, Kloos M, Vakili M, Karnevskiy M, Ahmed K, Bean RJ, Bielecki J, Dall'Antonia F, Kim Y, Kim C, Koliyadu J, Round A, Sato T, Sikorski M, Vagovič P, Sztuk-Dambietz J, Mancuso AP. Kirkwood HJ, et al. Among authors: vakili m. Sci Data. 2022 Apr 12;9(1):161. doi: 10.1038/s41597-022-01266-w. Sci Data. 2022. PMID: 35414146 Free PMC article.
Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography.
Pandey S, Calvey G, Katz AM, Malla TN, Koua FHM, Martin-Garcia JM, Poudyal I, Yang JH, Vakili M, Yefanov O, Zielinski KA, Bajt S, Awel S, Doerner K, Frank M, Gelisio L, Jernigan R, Kirkwood H, Kloos M, Koliyadu J, Mariani V, Miller MD, Mills G, Nelson G, Olmos JL Jr, Sadri A, Sato T, Tolstikova A, Xu W, Ourmazd A, Spence JCH, Schwander P, Barty A, Chapman HN, Fromme P, Mancuso AP, Phillips GN Jr, Bean R, Pollack L, Schmidt M. Pandey S, et al. Among authors: vakili m. IUCrJ. 2021 Sep 9;8(Pt 6):878-895. doi: 10.1107/S2052252521008125. eCollection 2021 Nov 1. IUCrJ. 2021. PMID: 34804542 Free PMC article.
Crystal structure of a bacterial photoactivated adenylate cyclase determined by serial femtosecond and serial synchrotron crystallography.
Kapetanaki SM, Coquelle N, von Stetten D, Byrdin M, Rios-Santacruz R, Bean R, Bielecki J, Boudjelida M, Fekete Z, Grime GW, Han H, Hatton C, Kantamneni S, Kharitonov K, Kim C, Kloos M, Koua FHM, de Diego Martinez I, Melo D, Rane L, Round A, Round E, Sarma A, Schubert R, Schulz J, Sikorski M, Vakili M, Valerio J, Vitas J, de Wijn R, Wrona A, Zala N, Pearson A, Dörner K, Schirò G, Garman EF, Lukács A, Weik M. Kapetanaki SM, et al. Among authors: vakili m. IUCrJ. 2024 Nov 1;11(Pt 6):991-1006. doi: 10.1107/S2052252524010170. IUCrJ. 2024. PMID: 39470573 Free PMC article.
269 results