Podobnik M - Search Results

1

Revised definition of substrate binding sites of papain-like cysteine proteases.

Turk D, Guncar G, Podobnik M, Turk B. Turk D, et al. Among authors: podobnik m. Biol Chem. 1998 Feb;379(2):137-47. doi: 10.1515/bchm.1998.379.2.137. Biol Chem. 1998. PMID: 9524065 Review.

2

Crystal structure of cathepsin B inhibited with CA030 at 2.0-A resolution: A basis for the design of specific epoxysuccinyl inhibitors.

Turk D, Podobnik M, Popovic T, Katunuma N, Bode W, Huber R, Turk V. Turk D, et al. Among authors: podobnik m. Biochemistry. 1995 Apr 11;34(14):4791-7. doi: 10.1021/bi00014a037. Biochemistry. 1995. PMID: 7718586

3

Crystal structures of human procathepsin B at 3.2 and 3.3 Angstroms resolution reveal an interaction motif between a papain-like cysteine protease and its propeptide.

Turk D, Podobnik M, Kuhelj R, Dolinar M, Turk V. Turk D, et al. Among authors: podobnik m. FEBS Lett. 1996 Apr 22;384(3):211-4. doi: 10.1016/0014-5793(96)00309-2. FEBS Lett. 1996. PMID: 8617355 Free article.

4

Crystal structure of the wild-type human procathepsin B at 2.5 A resolution reveals the native active site of a papain-like cysteine protease zymogen.

Podobnik M, Kuhelj R, Turk V, Turk D. Podobnik M, et al. J Mol Biol. 1997 Sep 5;271(5):774-88. doi: 10.1006/jmbi.1997.1218. J Mol Biol. 1997. PMID: 9299326

5

Crystal structure of porcine cathepsin H determined at 2.1 A resolution: location of the mini-chain C-terminal carboxyl group defines cathepsin H aminopeptidase function.

Guncar G, Podobnik M, Pungercar J, Strukelj B, Turk V, Turk D. Guncar G, et al. Among authors: podobnik m. Structure. 1998 Jan 15;6(1):51-61. doi: 10.1016/s0969-2126(98)00007-0. Structure. 1998. PMID: 9493267 Free article.

6

Structure of human dipeptidyl peptidase I (cathepsin C): exclusion domain added to an endopeptidase framework creates the machine for activation of granular serine proteases.

Turk D, Janjić V, Stern I, Podobnik M, Lamba D, Dahl SW, Lauritzen C, Pedersen J, Turk V, Turk B. Turk D, et al. Among authors: podobnik m. EMBO J. 2001 Dec 3;20(23):6570-82. doi: 10.1093/emboj/20.23.6570. EMBO J. 2001. PMID: 11726493 Free PMC article.

7

Crystal structure of Stefin A in complex with cathepsin H: N-terminal residues of inhibitors can adapt to the active sites of endo- and exopeptidases.

Jenko S, Dolenc I, Guncar G, Dobersek A, Podobnik M, Turk D. Jenko S, et al. Among authors: podobnik m. J Mol Biol. 2003 Feb 21;326(3):875-85. doi: 10.1016/s0022-2836(02)01432-8. J Mol Biol. 2003. PMID: 12581647

8

A mycobacterial cyclic AMP phosphodiesterase that moonlights as a modifier of cell wall permeability.

Podobnik M, Tyagi R, Matange N, Dermol U, Gupta AK, Mattoo R, Seshadri K, Visweswariah SS. Podobnik M, et al. J Biol Chem. 2009 Nov 20;284(47):32846-57. doi: 10.1074/jbc.M109.049635. Epub 2009 Sep 29. J Biol Chem. 2009. PMID: 19801656 Free PMC article.

9

Allostery and conformational dynamics in cAMP-binding acyltransferases.

Podobnik M, Siddiqui N, Rebolj K, Nambi S, Merzel F, Visweswariah SS. Podobnik M, et al. J Biol Chem. 2014 Jun 6;289(23):16588-600. doi: 10.1074/jbc.M114.560086. Epub 2014 Apr 18. J Biol Chem. 2014. PMID: 24748621 Free PMC article.

10

The non-catalytic "cap domain" of a mycobacterial metallophosphoesterase regulates its expression and localization in the cell.

Matange N, Podobnik M, Visweswariah SS. Matange N, et al. Among authors: podobnik m. J Biol Chem. 2014 Aug 8;289(32):22470-81. doi: 10.1074/jbc.M114.578328. Epub 2014 Jun 25. J Biol Chem. 2014. PMID: 24970891 Free PMC article.

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