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Sequence-to-sequence translation from mass spectra to peptides with a transformer model.
Nat Commun. 2024 Jul 30;15(1):6427. doi: 10.1038/s41467-024-49731-x.
Nat Commun. 2024.
PMID: 39080256
Free PMC article.
A learned score function improves the power of mass spectrometry database search.
Ananth V, Sanders J, Yilmaz M, Wen B, Oh S, Noble WS.
Ananth V, et al.
Bioinformatics. 2024 Jun 28;40(Suppl 1):i410-i417. doi: 10.1093/bioinformatics/btae218.
Bioinformatics. 2024.
PMID: 38940129
Free PMC article.
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A multi-species benchmark for training and validating mass spectrometry proteomics machine learning models.
Wen B, Noble WS.
Wen B, et al.
Sci Data. 2024 Nov 8;11(1):1207. doi: 10.1038/s41597-024-04068-4.
Sci Data. 2024.
PMID: 39516479
Free PMC article.
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