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An image analysis toolbox for high-throughput C. elegans assays.
Wählby C, Kamentsky L, Liu ZH, Riklin-Raviv T, Conery AL, O'Rourke EJ, Sokolnicki KL, Visvikis O, Ljosa V, Irazoqui JE, Golland P, Ruvkun G, Ausubel FM, Carpenter AE. Wählby C, et al. Nat Methods. 2012 Apr 22;9(7):714-6. doi: 10.1038/nmeth.1984. Nat Methods. 2012. PMID: 22522656 Free PMC article.
Morphology-guided graph search for untangling objects: C. elegans analysis.
Raviv TR, Ljosa V, Conery AL, Ausubel FM, Carpenter AE, Golland P, Wählby C. Raviv TR, et al. Med Image Comput Comput Assist Interv. 2010;13(Pt 3):634-41. doi: 10.1007/978-3-642-15711-0_79. Med Image Comput Comput Assist Interv. 2010. PMID: 20879454 Free PMC article.
RESOLVING CLUSTERED WORMS VIA PROBABILISTIC SHAPE MODELS.
Wählby C, Riklin-Raviv T, Ljosa V, Conery AL, Golland P, Ausubel FM, Carpenter AE. Wählby C, et al. Proc IEEE Int Symp Biomed Imaging. 2010 Jun 21;2010(14-17 April 2010):552-555. doi: 10.1109/ISBI.2010.5490286. Proc IEEE Int Symp Biomed Imaging. 2010. PMID: 21383863 Free PMC article.