R01 CA126239/CA/NCI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2007	5
2008	8
2009	3
2010	13
2011	6
2012	2
2013	1
2014	1
2018	1
2023	1
2024	0

1

Autoinhibited kinesin-1 adopts a hierarchical folding pattern.

Tan Z, Yue Y, Leprevost F, Haynes S, Basrur V, Nesvizhskii AI, Verhey KJ, Cianfrocco MA. Tan Z, et al. Elife. 2023 Nov 1;12:RP86776. doi: 10.7554/eLife.86776. Elife. 2023. PMID: 37910016 Free PMC article.

2

Analysis and validation of proteomic data generated by tandem mass spectrometry.

Nesvizhskii AI, Vitek O, Aebersold R. Nesvizhskii AI, et al. Nat Methods. 2007 Oct;4(10):787-97. doi: 10.1038/nmeth1088. Nat Methods. 2007. PMID: 17901868 Review.

3

A guided tour of the Trans-Proteomic Pipeline.

Deutsch EW, Mendoza L, Shteynberg D, Farrah T, Lam H, Tasman N, Sun Z, Nilsson E, Pratt B, Prazen B, Eng JK, Martin DB, Nesvizhskii AI, Aebersold R. Deutsch EW, et al. Proteomics. 2010 Mar;10(6):1150-9. doi: 10.1002/pmic.200900375. Proteomics. 2010. PMID: 20101611 Free PMC article. Review.

4

Combining results of multiple search engines in proteomics.

Shteynberg D, Nesvizhskii AI, Moritz RL, Deutsch EW. Shteynberg D, et al. Mol Cell Proteomics. 2013 Sep;12(9):2383-93. doi: 10.1074/mcp.R113.027797. Epub 2013 May 29. Mol Cell Proteomics. 2013. PMID: 23720762 Free PMC article. Review.

5

Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments.

Nesvizhskii AI. Nesvizhskii AI. Proteomics. 2012 May;12(10):1639-55. doi: 10.1002/pmic.201100537. Proteomics. 2012. PMID: 22611043 Free PMC article. Review.

6

A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics.

Nesvizhskii AI. Nesvizhskii AI. J Proteomics. 2010 Oct 10;73(11):2092-123. doi: 10.1016/j.jprot.2010.08.009. Epub 2010 Sep 8. J Proteomics. 2010. PMID: 20816881 Free PMC article. Review.

7

Proteomic interrogation of androgen action in prostate cancer cells reveals roles of aminoacyl tRNA synthetases.

Vellaichamy A, Sreekumar A, Strahler JR, Rajendiran T, Yu J, Varambally S, Li Y, Omenn GS, Chinnaiyan AM, Nesvizhskii AI. Vellaichamy A, et al. PLoS One. 2009 Sep 18;4(9):e7075. doi: 10.1371/journal.pone.0007075. PLoS One. 2009. PMID: 19763266 Free PMC article.

8

A global protein kinase and phosphatase interaction network in yeast.

Breitkreutz A, Choi H, Sharom JR, Boucher L, Neduva V, Larsen B, Lin ZY, Breitkreutz BJ, Stark C, Liu G, Ahn J, Dewar-Darch D, Reguly T, Tang X, Almeida R, Qin ZS, Pawson T, Gingras AC, Nesvizhskii AI, Tyers M. Breitkreutz A, et al. Science. 2010 May 21;328(5981):1043-6. doi: 10.1126/science.1176495. Science. 2010. PMID: 20489023 Free PMC article.

9

False discovery rates and related statistical concepts in mass spectrometry-based proteomics.

Choi H, Nesvizhskii AI. Choi H, et al. J Proteome Res. 2008 Jan;7(1):47-50. doi: 10.1021/pr700747q. Epub 2007 Dec 8. J Proteome Res. 2008. PMID: 18067251

10

SAINT: probabilistic scoring of affinity purification-mass spectrometry data.

Choi H, Larsen B, Lin ZY, Breitkreutz A, Mellacheruvu D, Fermin D, Qin ZS, Tyers M, Gingras AC, Nesvizhskii AI. Choi H, et al. Nat Methods. 2011 Jan;8(1):70-3. doi: 10.1038/nmeth.1541. Epub 2010 Dec 5. Nat Methods. 2011. PMID: 21131968 Free PMC article.

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