R01 GM-65982/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2003	1
2004	4
2005	3
2006	4
2007	2
2008	3
2009	1
2011	6
2012	2
2013	2
2015	1
2024	0

1

NMR structural inference of symmetric homo-oligomers.

Chandola H, Yan AK, Potluri S, Donald BR, Bailey-Kellogg C. Chandola H, et al. J Comput Biol. 2011 Dec;18(12):1757-75. doi: 10.1089/cmb.2010.0327. Epub 2011 Jun 30. J Comput Biol. 2011. PMID: 21718128 Free PMC article.

2

OSPREY: protein design with ensembles, flexibility, and provable algorithms.

Gainza P, Roberts KE, Georgiev I, Lilien RH, Keedy DA, Chen CY, Reza F, Anderson AC, Richardson DC, Richardson JS, Donald BR. Gainza P, et al. Methods Enzymol. 2013;523:87-107. doi: 10.1016/B978-0-12-394292-0.00005-9. Methods Enzymol. 2013. PMID: 23422427 Free PMC article.

3

Phase-independent rhythmic analysis of genome-wide expression patterns.

Langmead CJ, Yan AK, McClung CR, Donald BR. Langmead CJ, et al. J Comput Biol. 2003;10(3-4):521-36. doi: 10.1089/10665270360688165. J Comput Biol. 2003. PMID: 12935342

4

Dead-end elimination with backbone flexibility.

Georgiev I, Donald BR. Georgiev I, et al. Bioinformatics. 2007 Jul 1;23(13):i185-94. doi: 10.1093/bioinformatics/btm197. Bioinformatics. 2007. PMID: 17646295

5

Protein side-chain resonance assignment and NOE assignment using RDC-defined backbones without TOCSY data.

Zeng J, Zhou P, Donald BR. Zeng J, et al. J Biomol NMR. 2011 Aug;50(4):371-95. doi: 10.1007/s10858-011-9522-4. Epub 2011 Jun 25. J Biomol NMR. 2011. PMID: 21706248 Free PMC article.

6

An algebraic geometry approach to protein structure determination from NMR data.

Wang L, Mettu RR, Donald BR. Wang L, et al. Proc IEEE Comput Syst Bioinform Conf. 2005:235-46. doi: 10.1109/csb.2005.11. Proc IEEE Comput Syst Bioinform Conf. 2005. PMID: 16447981

7

Structure-based protein NMR assignments using native structural ensembles.

Apaydin MS, Conitzer V, Donald BR. Apaydin MS, et al. J Biomol NMR. 2008 Apr;40(4):263-76. doi: 10.1007/s10858-008-9230-x. Epub 2008 Mar 26. J Biomol NMR. 2008. PMID: 18365752

8

A polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments.

Langmead CJ, Yan A, Lilien R, Wang L, Donald BR. Langmead CJ, et al. J Comput Biol. 2004;11(2-3):277-98. doi: 10.1089/1066527041410436. J Comput Biol. 2004. PMID: 15285893

9

A Hausdorff-based NOE assignment algorithm using protein backbone determined from residual dipolar couplings and rotamer patterns.

Zeng J, Tripathy C, Zhou P, Donald BR. Zeng J, et al. Comput Syst Bioinformatics Conf. 2008;7:169-81. Comput Syst Bioinformatics Conf. 2008. PMID: 19642278 Free article.

10

A novel ensemble-based scoring and search algorithm for protein redesign and its application to modify the substrate specificity of the gramicidin synthetase a phenylalanine adenylation enzyme.

Lilien RH, Stevens BW, Anderson AC, Donald BR. Lilien RH, et al. J Comput Biol. 2005 Jul-Aug;12(6):740-61. doi: 10.1089/cmb.2005.12.740. J Comput Biol. 2005. PMID: 16108714

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