R01 GM070785/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2006	1
2007	2
2008	2
2009	1
2010	1
2011	1
2012	3
2013	4
2014	2
2015	2
2016	1
2019	1
2024	0

1

Packaging double-helical DNA into viral capsids: structures, forces, and energetics.

Petrov AS, Harvey SC. Petrov AS, et al. Biophys J. 2008 Jul;95(2):497-502. doi: 10.1529/biophysj.108.131797. Epub 2008 May 16. Biophys J. 2008. PMID: 18487310 Free PMC article. Review.

2

The icosahedral RNA virus as a grotto: organizing the genome into stalagmites and stalactites.

Harvey SC, Zeng Y, Heitsch CE. Harvey SC, et al. J Biol Phys. 2013 Mar;39(2):163-72. doi: 10.1007/s10867-013-9312-1. Epub 2013 Apr 27. J Biol Phys. 2013. PMID: 23860866 Free PMC article. Review.

3

DNA Conformational Changes Play a Force-Generating Role during Bacteriophage Genome Packaging.

Sharp KA, Lu XJ, Cingolani G, Harvey SC. Sharp KA, et al. Biophys J. 2019 Jun 4;116(11):2172-2180. doi: 10.1016/j.bpj.2019.02.034. Epub 2019 Apr 30. Biophys J. 2019. PMID: 31103227 Free PMC article.

4

DNA Scrunching in the Packaging of Viral Genomes.

Waters JT, Kim HD, Gumbart JC, Lu XJ, Harvey SC. Waters JT, et al. J Phys Chem B. 2016 Jul 7;120(26):6200-7. doi: 10.1021/acs.jpcb.6b02149. Epub 2016 May 26. J Phys Chem B. 2016. PMID: 27214211 Free PMC article.

5

DNA organization and thermodynamics during viral packing.

Locker CR, Fuller SD, Harvey SC. Locker CR, et al. Biophys J. 2007 Oct 15;93(8):2861-9. doi: 10.1529/biophysj.106.094771. Epub 2007 Jun 15. Biophys J. 2007. PMID: 17573426 Free PMC article.

6

Biophysical and ultrastructural characterization of adeno-associated virus capsid uncoating and genome release.

Horowitz ED, Rahman KS, Bower BD, Dismuke DJ, Falvo MR, Griffith JD, Harvey SC, Asokan A. Horowitz ED, et al. J Virol. 2013 Mar;87(6):2994-3002. doi: 10.1128/JVI.03017-12. Epub 2012 Dec 26. J Virol. 2013. PMID: 23269804 Free PMC article.

7

YUP: A Molecular Simulation Program for Coarse-Grained and Multi-Scaled Models.

Tan RK, Petrov AS, Harvey SC. Tan RK, et al. J Chem Theory Comput. 2006 May 1;2(3):529-540. doi: 10.1021/ct050323r. Epub 2006 Mar 18. J Chem Theory Comput. 2006. PMID: 22844233 Free PMC article.

8

Role of DNA-DNA interactions on the structure and thermodynamics of bacteriophages Lambda and P4.

Petrov AS, Harvey SC. Petrov AS, et al. J Struct Biol. 2011 Apr;174(1):137-46. doi: 10.1016/j.jsb.2010.11.007. Epub 2010 Nov 11. J Struct Biol. 2011. PMID: 21074621 Free PMC article.

9

Effects of pulling forces, osmotic pressure, condensing agents and viscosity on the thermodynamics and kinetics of DNA ejection from bacteriophages to bacterial cells: a computational study.

Petrov AS, Douglas SS, Harvey SC. Petrov AS, et al. J Phys Condens Matter. 2013 Mar 20;25(11):115101. doi: 10.1088/0953-8984/25/11/115101. Epub 2013 Feb 12. J Phys Condens Matter. 2013. PMID: 23399864 Free PMC article.

10

A model for the structure of satellite tobacco mosaic virus.

Zeng Y, Larson SB, Heitsch CE, McPherson A, Harvey SC. Zeng Y, et al. J Struct Biol. 2012 Oct;180(1):110-6. doi: 10.1016/j.jsb.2012.06.008. Epub 2012 Jun 28. J Struct Biol. 2012. PMID: 22750417 Free PMC article.

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