R01CA109755/CA/NCI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2007	1
2008	2
2009	8
2010	3
2011	1
2012	1
2013	1
2014	1
2015	1
2024	0

1

Correlating measurements across samples improves accuracy of large-scale expression profile experiments.

Alvarez MJ, Sumazin P, Rajbhandari P, Califano A. Alvarez MJ, et al. Genome Biol. 2009;10(12):R143. doi: 10.1186/gb-2009-10-12-r143. Epub 2009 Dec 30. Genome Biol. 2009. PMID: 20042104 Free PMC article.

2

Cupid: simultaneous reconstruction of microRNA-target and ceRNA networks.

Chiu HS, Llobet-Navas D, Yang X, Chung WJ, Ambesi-Impiombato A, Iyer A, Kim HR, Seviour EG, Luo Z, Sehgal V, Moss T, Lu Y, Ram P, Silva J, Mills GB, Califano A, Sumazin P. Chiu HS, et al. Genome Res. 2015 Feb;25(2):257-67. doi: 10.1101/gr.178194.114. Epub 2014 Nov 5. Genome Res. 2015. PMID: 25378249 Free PMC article.

3

The transcriptional network for mesenchymal transformation of brain tumours.

Carro MS, Lim WK, Alvarez MJ, Bollo RJ, Zhao X, Snyder EY, Sulman EP, Anne SL, Doetsch F, Colman H, Lasorella A, Aldape K, Califano A, Iavarone A. Carro MS, et al. Nature. 2010 Jan 21;463(7279):318-25. doi: 10.1038/nature08712. Epub 2009 Dec 23. Nature. 2010. PMID: 20032975 Free PMC article.

4

The N-Myc-DLL3 cascade is suppressed by the ubiquitin ligase Huwe1 to inhibit proliferation and promote neurogenesis in the developing brain.

Zhao X, D' Arca D, Lim WK, Brahmachary M, Carro MS, Ludwig T, Cardo CC, Guillemot F, Aldape K, Califano A, Iavarone A, Lasorella A. Zhao X, et al. Dev Cell. 2009 Aug;17(2):210-21. doi: 10.1016/j.devcel.2009.07.009. Dev Cell. 2009. PMID: 19686682 Free PMC article.

5

A human B-cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers.

Lefebvre C, Rajbhandari P, Alvarez MJ, Bandaru P, Lim WK, Sato M, Wang K, Sumazin P, Kustagi M, Bisikirska BC, Basso K, Beltrao P, Krogan N, Gautier J, Dalla-Favera R, Califano A. Lefebvre C, et al. Mol Syst Biol. 2010 Jun 8;6:377. doi: 10.1038/msb.2010.31. Mol Syst Biol. 2010. PMID: 20531406 Free PMC article.

6

An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma.

Sumazin P, Yang X, Chiu HS, Chung WJ, Iyer A, Llobet-Navas D, Rajbhandari P, Bansal M, Guarnieri P, Silva J, Califano A. Sumazin P, et al. Cell. 2011 Oct 14;147(2):370-81. doi: 10.1016/j.cell.2011.09.041. Cell. 2011. PMID: 22000015 Free PMC article.

7

Dissecting the interface between signaling and transcriptional regulation in human B cells.

Wang K, Alvarez MJ, Bisikirska BC, Linding R, Basso K, Dalla Favera R, Califano A. Wang K, et al. Pac Symp Biocomput. 2009:264-75. Pac Symp Biocomput. 2009. PMID: 19209707 Free PMC article.

8

ChIP-on-chip significance analysis reveals large-scale binding and regulation by human transcription factor oncogenes.

Margolin AA, Palomero T, Sumazin P, Califano A, Ferrando AA, Stolovitzky G. Margolin AA, et al. Proc Natl Acad Sci U S A. 2009 Jan 6;106(1):244-9. doi: 10.1073/pnas.0806445106. Epub 2008 Dec 31. Proc Natl Acad Sci U S A. 2009. PMID: 19118200 Free PMC article.

9

Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells.

Basso K, Saito M, Sumazin P, Margolin AA, Wang K, Lim WK, Kitagawa Y, Schneider C, Alvarez MJ, Califano A, Dalla-Favera R. Basso K, et al. Blood. 2010 Feb 4;115(5):975-84. doi: 10.1182/blood-2009-06-227017. Epub 2009 Dec 3. Blood. 2010. PMID: 19965633 Free PMC article.

10

STK38 is a critical upstream regulator of MYC's oncogenic activity in human B-cell lymphoma.

Bisikirska BC, Adam SJ, Alvarez MJ, Rajbhandari P, Cox R, Lefebvre C, Wang K, Rieckhof GE, Felsher DW, Califano A. Bisikirska BC, et al. Oncogene. 2013 Nov 7;32(45):5283-91. doi: 10.1038/onc.2012.543. Epub 2012 Nov 26. Oncogene. 2013. PMID: 23178486 Free PMC article.

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