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Year Number of Results
1983 1
1987 1
1990 1
1992 2
1993 1
1996 1
1999 1
2003 1
2006 1
2010 2
2012 1
2013 4
2014 9
2015 8
2016 9
2017 4
2018 11
2019 6
2020 5
2021 6
2022 7
2023 1
2024 6

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84 results

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Page 1
An atlas of active enhancers across human cell types and tissues.
Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F, Forrest ARR, Carninci P, Rehli M, Sandelin A. Andersson R, et al. Nature. 2014 Mar 27;507(7493):455-461. doi: 10.1038/nature12787. Nature. 2014. PMID: 24670763 Free PMC article.
A promoter-level mammalian expression atlas.
FANTOM Consortium and the RIKEN PMI and CLST (DGT); Forrest AR, Kawaji H, Rehli M, Baillie JK, de Hoon MJ, Haberle V, Lassmann T, Kulakovskiy IV, Lizio M, Itoh M, Andersson R, Mungall CJ, Meehan TF, Schmeier S, Bertin N, Jørgensen M, Dimont E, Arner E, Schmidl C, Schaefer U, Medvedeva YA, Plessy C, Vitezic M, Severin J, Semple C, Ishizu Y, Young RS, Francescatto M, Alam I, Albanese D, Altschuler GM, Arakawa T, Archer JA, Arner P, Babina M, Rennie S, Balwierz PJ, Beckhouse AG, Pradhan-Bhatt S, Blake JA, Blumenthal A, Bodega B, Bonetti A, Briggs J, Brombacher F, Burroughs AM, Califano A, Cannistraci CV, Carbajo D, Chen Y, Chierici M, Ciani Y, Clevers HC, Dalla E, Davis CA, Detmar M, Diehl AD, Dohi T, Drabløs F, Edge AS, Edinger M, Ekwall K, Endoh M, Enomoto H, Fagiolini M, Fairbairn L, Fang H, Farach-Carson MC, Faulkner GJ, Favorov AV, Fisher ME, Frith MC, Fujita R, Fukuda S, Furlanello C, Furino M, Furusawa J, Geijtenbeek TB, Gibson AP, Gingeras T, Goldowitz D, Gough J, Guhl S, Guler R, Gustincich S, Ha TJ, Hamaguchi M, Hara M, Harbers M, Harshbarger J, Hasegawa A, Hasegawa Y, Hashimoto T, Herlyn M, Hitchens KJ, Ho Sui SJ, Hofmann OM, Hoof I, Hori F, Huminiecki L, Iida K, Ikawa T, … See abstract for full author list ➔ FANTOM Consortium and the RIKEN PMI and CLST (DGT), et al. Among authors: mathelier a. Nature. 2014 Mar 27;507(7493):462-70. doi: 10.1038/nature13182. Nature. 2014. PMID: 24670764 Free PMC article.
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Grapotte M, Saraswat M, Bessière C, Menichelli C, Ramilowski JA, Severin J, Hayashizaki Y, Itoh M, Tagami M, Murata M, Kojima-Ishiyama M, Noma S, Noguchi S, Kasukawa T, Hasegawa A, Suzuki H, Nishiyori-Sueki H, Frith MC; FANTOM consortium; Chatelain C, Carninci P, de Hoon MJL, Wasserman WW, Bréhélin L, Lecellier CH. Grapotte M, et al. Nat Commun. 2021 Jun 2;12(1):3297. doi: 10.1038/s41467-021-23143-7. Nat Commun. 2021. PMID: 34078885 Free PMC article.
A map of direct TF-DNA interactions in the human genome.
Gheorghe M, Sandve GK, Khan A, Chèneby J, Ballester B, Mathelier A. Gheorghe M, et al. Among authors: mathelier a. Nucleic Acids Res. 2019 Feb 28;47(4):e21. doi: 10.1093/nar/gky1210. Nucleic Acids Res. 2019. PMID: 30517703 Free PMC article.
A map of direct TF-DNA interactions in the human genome.
Gheorghe M, Sandve GK, Khan A, Chèneby J, Ballester B, Mathelier A. Gheorghe M, et al. Among authors: mathelier a. Nucleic Acids Res. 2019 Aug 22;47(14):7715. doi: 10.1093/nar/gkz582. Nucleic Acids Res. 2019. PMID: 31251803 Free PMC article. No abstract available.
JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles.
Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Chèneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. Rauluseviciute I, et al. Among authors: mathelier a. Nucleic Acids Res. 2024 Jan 5;52(D1):D174-D182. doi: 10.1093/nar/gkad1059. Nucleic Acids Res. 2024. PMID: 37962376 Free PMC article.
MirGeneDB 2.0: the metazoan microRNA complement.
Fromm B, Domanska D, Høye E, Ovchinnikov V, Kang W, Aparicio-Puerta E, Johansen M, Flatmark K, Mathelier A, Hovig E, Hackenberg M, Friedländer MR, Peterson KJ. Fromm B, et al. Among authors: mathelier a. Nucleic Acids Res. 2020 Jan 8;48(D1):D132-D141. doi: 10.1093/nar/gkz885. Nucleic Acids Res. 2020. PMID: 31598695 Free PMC article.
Put science first and formatting later.
Khan A, Montenegro-Montero A, Mathelier A. Khan A, et al. Among authors: mathelier a. EMBO Rep. 2018 May;19(5):e45731. doi: 10.15252/embr.201845731. Epub 2018 Apr 12. EMBO Rep. 2018. PMID: 29650529 Free PMC article.
84 results